| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1801 |
|---|
| Symbol | |
|---|
| ID | 3367309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2074515 |
|---|
| End bp | 2075531 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637652149 |
|---|
| Product | 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| Protein accession | YP_234886 |
|---|
| Protein GI | 66045045 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.199974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGA GCAAGTTCAA GCGCTACCCT CTGACCTTCG GCCCCTCGCC CATTACCCCA
CTAAAACGCC TGAGTGAGCA CCTGGGCGGC AAGGTCGAGT TGTATGCCAA GCGCGAGGAT
TGCAACAGCG GTCTGGCCTT CGGCGGCAAC AAGACCCGCA AACTGGAATA CCTGGTGCCG
GAAGCCATCG ACGGCGGCTA CGACACGCTG GTATCGATCG GTGGCATCCA GTCCAACCAG
ACCCGTCAGG TGGCAGCCGT GGCGGCGCAT CTGGGCATGA AGTGCGTGCT GGTTCAGGAG
AATTGGGTCA ACTATTCCGA CGCGTTGTAC GACCGGGTCG GCAATATCGA GATGTCGCGC
ATCATGGGCG CCGATGTGCG CCTGGATTCG GCAGGCTTCG ATATCGGCAT TCGCCCGAGC
TGGGAAAAGG CCATGGCCGA CGTCGAGGAA AGCGGCGGCA AGCCGTTCCC GATTCCTGCG
GGCTGCTCGG AACACCCTTA TGGCGGCCTG GGGTTCGTGC GTTTTGCCGA TGAAGTGCGC
CAGCAGGAAG AAGAGCTGGG CTTCAAATTC GACTACATTG TGGTCTGCTC GGTGACCGGC
AGCACTCACG CAGGCATGCT GGTGGGCTTC GCTGCCGATG GCCGGGCACA ACGTGTGATC
GGTATCGACG CGTCGGCGAA ACCGGAAAAG ACCCGCGCGC AGGTCCTGCG CATCGCTCAG
AACACTGCAA AACTGGTGGA GCTGGGCCGC GAAATAACCG CCGAAGACGT GGTGCTCGAC
ACCCGCTACG CCTACCCGGA ATACGGCCTG CCGAACGATG GCACCCTCGA AGCCATCCGC
CTCTGCGCCC GCCTGGAAGG CGTGCTGACC GACCCGGTCT ACGAAGGCAA ATCCATGCAC
GGCATGATCG ACATGGTGCG CAATGGCGAA TTCCCCGAAG GCTCGAAAGT GCTCTACGCC
CACCTGGGCG GCGTGCCGGC GCTGAATGCC TACAGCTTTC TGTTCAAGGA CGGTTGA
|
|---|
| Protein sequence | MNLSKFKRYP LTFGPSPITP LKRLSEHLGG KVELYAKRED CNSGLAFGGN KTRKLEYLVP
EAIDGGYDTL VSIGGIQSNQ TRQVAAVAAH LGMKCVLVQE NWVNYSDALY DRVGNIEMSR
IMGADVRLDS AGFDIGIRPS WEKAMADVEE SGGKPFPIPA GCSEHPYGGL GFVRFADEVR
QQEEELGFKF DYIVVCSVTG STHAGMLVGF AADGRAQRVI GIDASAKPEK TRAQVLRIAQ
NTAKLVELGR EITAEDVVLD TRYAYPEYGL PNDGTLEAIR LCARLEGVLT DPVYEGKSMH
GMIDMVRNGE FPEGSKVLYA HLGGVPALNA YSFLFKDG
|
|---|
| |