| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1799 |
|---|
| Symbol | |
|---|
| ID | 3367307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2072602 |
|---|
| End bp | 2073534 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637652147 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234884 |
|---|
| Protein GI | 66045043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.323338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAT ACCTGTCGAT TGCTCCGAGC GTCTCGCGGC CTGCCTGGCA CCAGGCCATT
CCTCTGCCCC TGCTGGAAGC TGCGCTGGTT CTGACCTGGA GTTCGGGCTT CGTCGGCGCA
CGCTTTTCCC TTGACCACGC GCCGCCGCTG CTGGTGGTGT TCTGGCGTTG TGTGGTGGTC
ACCCTGATCC TGCTGCCTTT TGTCGCCAGG CAACTGAGGT CGATCCCGGC TGCCACGCTG
CTGAAAAACG CAGGTATCGG CCTGCTGGCC ATGACCGGCT ACGTCGCCGG GGTCACGCAG
GGCATTGCGC TGGGTGTGCC TGCCGGCCTC GCTGCGCTGT TTGCCGATTT GTTGCCGATG
GGCATGGCAC TCCTGGCGGC AGTAGTGCTC GGCCAACGGC TGGCCTGGCC AATCTGGGCA
GGGCTGTTTG TCGGGCTGAT CGGTGTCGTG CTGGTGACCT ACAGCGCGCT GGCGGTGGGT
GACGCACCGC TGTGGGCCTA CGGCCTGCCG CTGCTGGGTA TGTTTTCGCT GGCCATTGCG
ACGTTGTGGC AGAAACAATC CGGTACCGCG CAACCCATGG CACTGCTGCC CAACCTGTGG
CTGCAATGCG CTGTCTCCAG CGTCGCCTTC GCGATCATTC AAGGCACACA GGGCCGCCTG
GCGCCTGTAG CCAGCACCGG CTTTGCGCTG AGCGTGCTAT GGACCGTGGG GCTGGCAACC
CTGGGCGGGT ACGGACTGTA TTGGGTGTGT CTGCGCCGCG CGTCAGCCAC CCGCGTCGCC
AGTGTGCTGT ACCTCAGCCC ACCGGTGACG ATGCTCTGGG CCTGGGCGAT GTTCGACGAA
CCGCTGTCCT GGCAGATGGC GTCAGGCATG GCGGTGTCAG GTATCGGCGT GTGGATGGTG
GTGCGGGCGG AACAACGGCA GTCGGCCTCC TGA
|
|---|
| Protein sequence | MNPYLSIAPS VSRPAWHQAI PLPLLEAALV LTWSSGFVGA RFSLDHAPPL LVVFWRCVVV
TLILLPFVAR QLRSIPAATL LKNAGIGLLA MTGYVAGVTQ GIALGVPAGL AALFADLLPM
GMALLAAVVL GQRLAWPIWA GLFVGLIGVV LVTYSALAVG DAPLWAYGLP LLGMFSLAIA
TLWQKQSGTA QPMALLPNLW LQCAVSSVAF AIIQGTQGRL APVASTGFAL SVLWTVGLAT
LGGYGLYWVC LRRASATRVA SVLYLSPPVT MLWAWAMFDE PLSWQMASGM AVSGIGVWMV
VRAEQRQSAS
|
|---|
| |