| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1795 |
|---|
| Symbol | |
|---|
| ID | 3367303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2067660 |
|---|
| End bp | 2068529 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637652143 |
|---|
| Product | taurine dioxygenase |
|---|
| Protein accession | YP_234880 |
|---|
| Protein GI | 66045039 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.119759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAA TGGCACTCAA GGCCATAGAA GGTATCGCAG GCACCGTGCG TGCGCCGTAT
CAGAGCATCA CGGTCAACCG CCTGACACCG ATCATCGGTG CCGAGGTCGG CGGTGTCGAT
CTGTCGCAGC CACCCAGTGC GGAGCAGTTG ACGGAAATCC GCCGGGCCTT TCTGGAAAAT
CACGTGCTGG TGTTTCGCGA CCAGCACCTG ACGGTCGAGC AGCACAAGGC ATTCGGCCGA
TTGTTTGGTC CGTTGCGCGC CTTGCCGGTG GACAGCATCG ATGGCGATGA CCCGGAACTG
GTCGTGGTGC GCGCCAACGC CCAATCGCGT TTCGCTGCGG GCGAGCTATG GCACACCGAC
GGCACCGCTG ATCTGGAGCC GTCGATGGGC TCGATGCTGT ACGTCAAGGA GACACCCGCC
ATCGGCACCG GCGGCGACAC GCTGTTTGCC AACATGCACC TGGCCATTGA AATGCTCTCG
CCGGCGATGC AGCAGTTTCT CGGCGGGCTG ACAGCCATTC ACGATGGCGA GATTCCGTGG
AAGGGCTATC AGCCACCTCC CGGCCTCCCG AAAAGCGAGC ACCCGGTGGT GGTTCGCCAC
CCCGAAACCG GACGTCGCAG CCTGTTCGTC AATTCCGGGT TCACCTCGCA TATCGTGCAA
CTCTCGCCCG GCGAGAGCCG CACCGTGCTG AGTATGCTGT TCGATCTGAT CGCCCGCGAA
CCTTGCCTCA GTTGTCGCGT GCGCTGGGAA CCGAACACGC TGGTGTTCTG GGATAACCGT
TGCACCCAGC ATCACGCGGT GTGGGATTAC TTCCCGCACT CGCGCTATGG CGAGCGGGTG
ACGATTCTCG GAGGGCGGCC TCAGGCCTGA
|
|---|
| Protein sequence | MDQMALKAIE GIAGTVRAPY QSITVNRLTP IIGAEVGGVD LSQPPSAEQL TEIRRAFLEN
HVLVFRDQHL TVEQHKAFGR LFGPLRALPV DSIDGDDPEL VVVRANAQSR FAAGELWHTD
GTADLEPSMG SMLYVKETPA IGTGGDTLFA NMHLAIEMLS PAMQQFLGGL TAIHDGEIPW
KGYQPPPGLP KSEHPVVVRH PETGRRSLFV NSGFTSHIVQ LSPGESRTVL SMLFDLIARE
PCLSCRVRWE PNTLVFWDNR CTQHHAVWDY FPHSRYGERV TILGGRPQA
|
|---|
| |