Gene Psyr_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1790 
Symbol 
ID3367298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2042710 
End bp2043705 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content60% 
IMG OID637652138 
Productaldo/keto reductase 
Protein accessionYP_234875 
Protein GI66045034 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0366045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG TAAAGCTTGG CAACACAGGA CTGGATATTT CCAGACTGTG CCTGGGATGC 
ATGACATTCG GCGAGCCCGA TGCCGGAACG CATCCCTGGA CACTGGGCGA AGAAGCAAGC
AGACCGATCA TCAAACACGC CGTCGAGCAA GGCATCAATT TTTTTGACAC GGCCAATAGC
TACTCGGCAG GTACTTCGGA AACCATCGTC GGTAAATTGC TCAAAGAGTT CACACGTCGC
GACGAGACCG TGATCGCCAC GAAGGTGTTC TTTCCGGCAA ACATGTGGGA AGGCTCGACC
CGCCCCAACG AAAAGGGGCT CTCGCGCAAG GCCATCATGT CCAGTATCGA CGCGAGCCTG
ACGCGACTCG GCACTGACTA TGTCGACCTG TACCAGATCC ATCGCTGGGA CTATGACACG
CCCATCGAAG AAACCATGGA AGCCCTGCAC GATGTGGTCA GGGCCGGCAA GGCCAGGTAC
ATCGGCGCGT CTTCCATGTA CGTATGGCAG TTCGCCAAGG CCCAGCAGGT CGCGACCGCG
CATGGCTGGA GCAGGTTCGT CTCGATGCAG AACTACCTGA ACCTGGTCTA TCGCGAAGAA
GAGCGCGAGA TGATCCCGCT GTGTATCGAT CAGGGGGTCG GCCTGATGCC GTGGAGCCCG
ATGGCACGCG GCAGGCTGAC CAGGCCCCAT GGTCAGCAGA CCGAGCGGAC CAGAACCGAC
GTATCCGGCC AGTCGTTTTA CGAGGCGACA GAAAAGGAAG ACGGTCGCGT GATCGATGCC
GTGGAACAGC TGGCCGCAGA GCGCGGGGTG CCGATGGCGC AAATCGCACT GGCCTGGGTA
TTGGCCAAGC GCGGTGTATC CGCGCCCATC GTCGGCGCCT CCAAGGCGAC GCAACTGGAC
GATGCCATCG CGGCACTGCA ACTGGTGCTC AGTGATGAGG ACATCAAACG CCTCGAGGCA
CCGTACGTGC CCCATGCAGT AACCGGATTC GTCTGA
 
Protein sequence
MDYVKLGNTG LDISRLCLGC MTFGEPDAGT HPWTLGEEAS RPIIKHAVEQ GINFFDTANS 
YSAGTSETIV GKLLKEFTRR DETVIATKVF FPANMWEGST RPNEKGLSRK AIMSSIDASL
TRLGTDYVDL YQIHRWDYDT PIEETMEALH DVVRAGKARY IGASSMYVWQ FAKAQQVATA
HGWSRFVSMQ NYLNLVYREE EREMIPLCID QGVGLMPWSP MARGRLTRPH GQQTERTRTD
VSGQSFYEAT EKEDGRVIDA VEQLAAERGV PMAQIALAWV LAKRGVSAPI VGASKATQLD
DAIAALQLVL SDEDIKRLEA PYVPHAVTGF V