| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1778 |
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| Symbol | |
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| ID | 3367286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2025489 |
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| End bp | 2028359 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637652127 |
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| Product | PAS |
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| Protein accession | YP_234864 |
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| Protein GI | 66045023 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.584017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.493951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCTGC GCAGAATGCT TGAAGAAGCC GGCATCGACG CCGCAACGAA TACCTGTCGG
CCCTCAGCCG TCGCCCGGGC GGCACGCCAG CGCGCAGTCT TTGACAGCGC GATGGATTTC
GCCATGATCC TGACCGATGG CAACGGCATC ATCACCGACT GGAACCCTGG CGCAGAGCAG
GTTCTGGGCT GGACCCAGGA AGAGATGGTC GGTCAGAGCG CCAAGCGTTT CTTTACGCCC
GAAGACCTGG CCAGCAACCG GGTCGAACAT GAAATGCAGC TTGCGCTGAG CGTAGGCCGG
GCGTCGGACG AGCGCTGGCA CCTGCGCAAG GACGGTGAGC TGTTCTGGGC ATCAGGCGAG
ATGATGCCGC TCTACGATGA GAACAATACC CACCTCGGTT TCGTGAAAAT CCTGCGCGAC
CGTACCCGCG AGCATCTGGC CGGCCGCGCG ACCGAAGAAG CCCAGGAACG TTACCGGCTC
GCCGCCAAGG CGACCAATGA CTCGATCTGG GACTGGGACT TTGCAACCAA TCTGGTGCTC
TGGAACGACG CGCTGGAAGA GGCTTACGGC CACCCGCTGG CAACCCTGGA CAACTCCGGT
GACTGGTGGA TCGGCCAGAT CCATCCCGAC GACCGCACCC GCGTATACGA CTCCATTCAT
GCCGTGATCG ACGGCAATGG TACTGCCTGG ACGGATGAAT ACCGCTTTCG TCGTCTGGAC
GGGTCCTATG CCGACGTACT GGACCGCGGT CATGTGATAC GCGATATCGA CGGCCAGGCG
GTGCGCATGA TCGGCGCAAT GCTCGACATG TCGCAGATGC GCAAGGCCGA GACGGCGCTG
CGCCAGAGCG AAGAGCGCTC GAGGGCCATG CTGGAGACCA TCGAAGCCGC ATTCGCCATC
ATTCAGGTCA GGTTCGATGC CGATGACAGC CCGGTGGACT ACCGCTTCAT CGAGGCCAAC
CCTGCCTTTG AACGTCAGGC CGGTGTCGAT TTGCGCGGCA AGTGGGTGAC CGAGTTCGCG
CCGGACCTGG AGCGGTTCTG GTTCGAAGCC TATGGCAACG TAGCCAAAAC CGGCGAGCCT
GCCAGCTTCG AGAACTATGC CAAGGCGTTC GAGCGCTGGT TCGAAGTCAA GGCGGTGCGT
GTCGGTGAAC CGGCTGATCG GCAGATTGCG GTGATCTTCA GCGATGTGAC GGCGCGACGC
GATGCCGAGG AGCGCTTGCG CACCAGCGAG GCCGTCGCAC GCGAAAACAT CGACCGCGTT
CAGCTCGCCC TGGCCGCCGG TGCAATCATC GGCACCTGGC ACTGGGACTT GCCGACCGAT
CGCTTTACCG TCGACGAAGC CTTCGCCAAG GCCTTCGGTC TGGACCCCGC GCTGGGCCGT
GAAGGCCTGA GTCTGGAGCA AGTCATTGCC ACTGTTCACC CGGAAGACAA GCAAGGCCTG
ATCACTGCGA TCAATGCGGT CATCACCAAC GGGCGTGTTT ACGCCCACCA GTACCGCGTT
CGTCGTACTG ATGGCATCTA CTACTGGATC GAAGCCAACG GCCGGGTCGA CCGGGCCGAG
GATGGCACGC CACTGAGCTT CCCCGGCGTG CTCATCAACG TTGACGAACG GCGCGCCGTG
GCGGCAGAAC GCGACCGTGC CACTGCCGCG CTGCGTGCCC TCAACGACAC GCTTGAGCAA
CGCGTGGCAG CGCGCACCAC CGAGCTCATG CAGGCCGAAG AGAAGCTGCG CCAGTCGCAG
AAAATGGAAG CGGTCGGGCA ACTGACCGGT GGCCTCGCCC ACGACTTCAA CAACCTGCTG
GCAGGCATTT CCGGTGCTCT GGAACTGATG GGCACCCGGA TCGAGCAAGG GCGCTGGGGC
GAGGTCGACA AGTACATCGT GACGGCCCAG GGCGCGGCCA AACGTGCCGC GGCTCTGACG
CACCGGCTGC TGGCCTTCTC TCGCCGCCAG ACCCTGGACC CGCAGCCGAC TGACGTGAAC
AGGCTGATGA AAGGCATGAC CGACCTGATC CAGCGCACCG TCGGCCCCAG CATCGTGGTC
GAGACCCTGG GTGCCACGGG GCTGTGGCCG ACACTGGTCG ACGCCAGCCA GCTGGAAAAC
GCGCTGCTGA ACCTGTGCAT CAACGCCCGC GATGCCATGC CGGACGGCGG ACGCATCACC
ATCGAGGCGA GCAACCGCTG GATAGACGGC GATGTGGCAC GCGCACACGA TATGCCTGAG
GGCCATTATC TGTCGCTGTG CGTCACCGAT ACCGGTACCG GCATGACGCC TGATGTCATC
GCCAAGGCAT TCGACCCGTT CTTCACCACC AAACCCATTG GCCAGGGCAC CGGGCTGGGT
CTGTCGATGA TTTACGGGTT CGCCAATCAG TCTGGCGGAC GGGTGCGTAT TCAGTCAGAG
GTCGGCAAGG GAACCGCGAT ATCCCTGTAC CTGCCTCGCT ACGACGGCAC TGCGGCCAGA
GACGAAGGCG ATGTGCACAA GGCACCGTTC GAGTTCACCC AGTCCGGGGA AACCATCCTG
ATCGTGGACG ACGAACCCAC GGTGCGCATG CTGCTCACCG ACGCCCTCGG CGACCTGGGC
TATACGCTGA TCGAAGCCGC CGACAGCCTG GCTGGCCTCA AGCTGCTGCG TTCGGATGTG
CATATCGACC TGCTCATCAC TGACGTGGGT TTGCCGGGCG GCATGAACGG ACGACAAATG
GCCGATGCCG GACGCGAGGT CCGCCCGCAT CTGAAAACCC TGTTCATCAC CGGCTACGCG
GAAAACGCCG CCATCGGTGA CGAACAGCTC GGGCCAGGAA TGCGCGTACT GACCAAGCCG
TTTGCGATTG AAGCGTTGGC CGCCAGAGTC CAGGAACTGA TGGGTGCCTG A
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| Protein sequence | MDLRRMLEEA GIDAATNTCR PSAVARAARQ RAVFDSAMDF AMILTDGNGI ITDWNPGAEQ
VLGWTQEEMV GQSAKRFFTP EDLASNRVEH EMQLALSVGR ASDERWHLRK DGELFWASGE
MMPLYDENNT HLGFVKILRD RTREHLAGRA TEEAQERYRL AAKATNDSIW DWDFATNLVL
WNDALEEAYG HPLATLDNSG DWWIGQIHPD DRTRVYDSIH AVIDGNGTAW TDEYRFRRLD
GSYADVLDRG HVIRDIDGQA VRMIGAMLDM SQMRKAETAL RQSEERSRAM LETIEAAFAI
IQVRFDADDS PVDYRFIEAN PAFERQAGVD LRGKWVTEFA PDLERFWFEA YGNVAKTGEP
ASFENYAKAF ERWFEVKAVR VGEPADRQIA VIFSDVTARR DAEERLRTSE AVARENIDRV
QLALAAGAII GTWHWDLPTD RFTVDEAFAK AFGLDPALGR EGLSLEQVIA TVHPEDKQGL
ITAINAVITN GRVYAHQYRV RRTDGIYYWI EANGRVDRAE DGTPLSFPGV LINVDERRAV
AAERDRATAA LRALNDTLEQ RVAARTTELM QAEEKLRQSQ KMEAVGQLTG GLAHDFNNLL
AGISGALELM GTRIEQGRWG EVDKYIVTAQ GAAKRAAALT HRLLAFSRRQ TLDPQPTDVN
RLMKGMTDLI QRTVGPSIVV ETLGATGLWP TLVDASQLEN ALLNLCINAR DAMPDGGRIT
IEASNRWIDG DVARAHDMPE GHYLSLCVTD TGTGMTPDVI AKAFDPFFTT KPIGQGTGLG
LSMIYGFANQ SGGRVRIQSE VGKGTAISLY LPRYDGTAAR DEGDVHKAPF EFTQSGETIL
IVDDEPTVRM LLTDALGDLG YTLIEAADSL AGLKLLRSDV HIDLLITDVG LPGGMNGRQM
ADAGREVRPH LKTLFITGYA ENAAIGDEQL GPGMRVLTKP FAIEALAARV QELMGA
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