Gene Psyr_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1774 
Symbol 
ID3367282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2020670 
End bp2021737 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID637652123 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_234860 
Protein GI66045019 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCTT CGCCTCCCCT GCCCGGGCCA GGCCGCGCGT GGACAGCCAT GAACCACAGT 
ATCGCTCACC ACCATCAGGA CTCCGACCTT TTCGGTCTGC TCTACGGCTT CCGTTTTCGC
CATGGTGAAA GTGGCCAGGA AATCGGTTCG GCCGCCGCGC TGGATTACCT GCAAAACCCT
CCCGAAGAAA ACGGCTTCAT CTGGCTGCAC CTGAACCTCT CGCACGCGGC CTGCGAACGC
TGGATGAAAG CCCAGCTGGA CCTTCCGGAA GAGTTTTTCG AAGCATTGCA CGAGGGCTCG
CGTTCGACCC GGATCGAGCA CGTGGATACC ACGCTGCTGG CGGTCGTCAA CGATGTGGTG
TTCGACTTCA ACAGGCTCTC GACGGATATT TCCACCCTGT GGGTCTGTGC CCGCCAGCGT
TTGCTGATCA CCGCCCGGCT GCAGCCACTG CGTTCGGTGG ACAAGCTGCG CTCGGCGGTC
AAGCGCGGCG AGCAATTCGA CTCACCGCTG GAGCTCCTCG CCCACCTGCT GAGCGACCAG
GGCGAAGTGC TGACGCAGTT CCTGCGCAAG ACCAGCGTCA ACGTCGACCG CATCGAAGAT
CAGTTGCTTT CGCAGCGACT GAGCAACAAT CGCTCCGAAC TCGGCGCCAT GCGCCGGGTG
CTGGTCCGTC TGCAACGCCT GCTGGCGCTG GAACCCGGTT CGTTGATGCG CCTGTTGCAC
AAACCTCCGC AATGGCTGCG CGAACAGGAT GTCCAGGCGT TGCGTCAGTC CATCGAAGAG
TCCTCACTGG TGATCAACGA CCTGACGGCG CTGGGCGAGC GCATCAAACT GTTACAGGAA
GAAATTGCCG CCAACCTCAA CGAACAGAGC AGTAGAACCC TGTTTACCCT GACCGTGGTG
ACTGTTCTGG CCTTGCCGAT CAACATCGTT GCCGGCTTTT TCGGCATGAA CGTGGGCGGC
GTACCGCTGG CCTCTGACCC TGAGGGCTTC TGGATTCTGG TGGCGCTGGT CGCGACCTTC
ACGCTGGTCG CCGGGCGCTG GGCATTCCGC AAACGCGGCG ATTACTGA
 
Protein sequence
MRPSPPLPGP GRAWTAMNHS IAHHHQDSDL FGLLYGFRFR HGESGQEIGS AAALDYLQNP 
PEENGFIWLH LNLSHAACER WMKAQLDLPE EFFEALHEGS RSTRIEHVDT TLLAVVNDVV
FDFNRLSTDI STLWVCARQR LLITARLQPL RSVDKLRSAV KRGEQFDSPL ELLAHLLSDQ
GEVLTQFLRK TSVNVDRIED QLLSQRLSNN RSELGAMRRV LVRLQRLLAL EPGSLMRLLH
KPPQWLREQD VQALRQSIEE SSLVINDLTA LGERIKLLQE EIAANLNEQS SRTLFTLTVV
TVLALPINIV AGFFGMNVGG VPLASDPEGF WILVALVATF TLVAGRWAFR KRGDY