Gene Psyr_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1770 
Symbol 
ID3367278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2014184 
End bp2015281 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID637652119 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_234856 
Protein GI66045015 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC AGGTTTCATC CGCCCGCCCG GTTCGACCTT CCGCCAGCCG GGATTCGATC 
GTTATCGACG TGCGTAACCA CATCGGACAC TTGACCCTCA ATCGTCCGGA AGGCCTGAAC
GCAATCGATC TGGACATGGT CCGCACACTT CGCCAGCAAC TTGACCGCTG GGCCGACGAC
CCCTCGGTTC ATGCCGTGGT CCTGCGCGGC GCAGGCGGCA AGGCGTTCTG CGCCGGTGGC
GATATCCGTT CGCTGTATGA AAGCCACCAG AGCGGCCAGG ATCTGCACCA CACGTTTTTT
GCCGAAGAGT ACGAGCTGGA CCTGGCCATT CACCGCTACC GCAAGCCGGT ACTGGCCCTG
ATGGATGGCC TGGTGCTGGG CGGCGGCATG GGGCTGGTCC AGGGAGCCGA CCTGCGCGTG
GTCACCGAAC GCAGCCGCCT CGGCATGCCG GAGGTCGCCA TCGGTTATTT CCCTGATGTC
GGCGGCAGTT ATTTTCTCTC GCGGCTGCCC GGCGAACTCG GGACCTGGCT GGGCGTGACC
GGGTCGCAGA TCGGTGCTGC CGACGCGTTG TACTGCGGCC TTGCCAACTG GTCCATGAAC
AGCGAACTGC TGCCGCGCCT CGACCACATG CTCGATCATC TGAAATGGAA GTCGACCCCG
CTCAAGGACC TGCAGGGTGC GCTGGCCAAG CTGGCGACCC AGCGTCTGCC CTCCCCTCCG
CTGGAATCCC TGCGCCACGC CATCGACCAC TTTTTCGGGC TGCCGGATGT TCCCAGCATG
CTTGAGCAAC TGCAACAGGT GGTCATCGGC GACACCCGCG AGTGGGCGCT GGATACCGTA
GCCCGAATGA AAGCTCACTC ACCGCTGGGC ATGGCGGTGA CCCTGGAAAT GCTGCGCCGT
GGCCGTCATC TGTCGCTGCC GGCCTGCTTC GCCATGGAGT TGCACCTGGA CCGCCAATGG
TTCGAACGCG GTGACCTGAT CGAGGGCATA CGTGCGCTGA TCATCGATAA AGACAAGAAG
CCGCAATGGA AACACGCCAG CGCGCAGGAC GTCAGTGCCG CGCAGGTGCA GAGTTTCTTC
AGCGGTCTGG AGAATTGA
 
Protein sequence
MSSQVSSARP VRPSASRDSI VIDVRNHIGH LTLNRPEGLN AIDLDMVRTL RQQLDRWADD 
PSVHAVVLRG AGGKAFCAGG DIRSLYESHQ SGQDLHHTFF AEEYELDLAI HRYRKPVLAL
MDGLVLGGGM GLVQGADLRV VTERSRLGMP EVAIGYFPDV GGSYFLSRLP GELGTWLGVT
GSQIGAADAL YCGLANWSMN SELLPRLDHM LDHLKWKSTP LKDLQGALAK LATQRLPSPP
LESLRHAIDH FFGLPDVPSM LEQLQQVVIG DTREWALDTV ARMKAHSPLG MAVTLEMLRR
GRHLSLPACF AMELHLDRQW FERGDLIEGI RALIIDKDKK PQWKHASAQD VSAAQVQSFF
SGLEN