Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1761 |
Symbol | |
ID | 3367269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2003028 |
End bp | 2003807 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652110 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_234847 |
Protein GI | 66045006 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.427726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.639702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAGA TCCACGCCCT TCCTGCTTTC AATGACAACT ACATATGGTT GTTACAAGAC CTTTCGAGCC AGCAGTGCGC TGTCGTCGAT CCGGGCGACG CAAAGCCGGT GCTGGGCTGG CTGGCGCAGA ATCCCGACTA CCGGCTGACC GATATCCTGA TCACGCACCA CCACAATGAT CATGTGGGCG GTGTTGCGGA ACTCAAGCAG TCGACCGCGG CGCGGGTGCT GGGCCCAGCG GCCGAGACCA TACCGGCGCG CGATATCGCG CTGGTCGACA ATGACCGGAT GACCGTGCTG GGCCTGGAAT TTGTGGTGCA TGCGGTTCCA GGCCACACGC TGGGGCATAT CGCGTTTTAT CATGAGGACG CCACGACGCC CCTGCTGTTC AGCGGCGACA CGCTGTTTGC CGCCGGCTGT GGACGGCTGT TCGAGGGCAC GCCACAACAG ATGCACGATT CTCTCGGCCG CCTGGCCAAA CTGCCGGACA GCACACTGAT CTACTGCGCT CACGAATACA CGCTGAGCAA CCTGCGCTTT GCCCAGGCCG TCGAGCCCGC CAATGTCGAT ATTGCCGAAC GCCTGGCCGA AGTGACGCGC TGGCGCAGCG AAAATCGCAT CAGTCTTCCT TCGAATATGG CACTGGAAAA ACGCACCAAC CCCTTCCTGC GTACCGGGGA AACATCCGTT AAAGAAAAAG CGGACGAACG GAGCGACGCG CAAAACACCT CGCAGAGTGC GGTCTTTGCA AGCCTGAGGG CATGGAAAGA TAAGTTCTGA
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Protein sequence | MIQIHALPAF NDNYIWLLQD LSSQQCAVVD PGDAKPVLGW LAQNPDYRLT DILITHHHND HVGGVAELKQ STAARVLGPA AETIPARDIA LVDNDRMTVL GLEFVVHAVP GHTLGHIAFY HEDATTPLLF SGDTLFAAGC GRLFEGTPQQ MHDSLGRLAK LPDSTLIYCA HEYTLSNLRF AQAVEPANVD IAERLAEVTR WRSENRISLP SNMALEKRTN PFLRTGETSV KEKADERSDA QNTSQSAVFA SLRAWKDKF
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