| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1758 |
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| Symbol | |
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| ID | 3367266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1997504 |
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| End bp | 1999360 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652107 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_234844 |
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| Protein GI | 66045003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.316004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0569954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTC TGCACTCCCT GCGCTCGCAG GCAGCCGGCC TGCTGCTGGC CAGCCTCGCC
TGCACGGTAC AGGCTGCGCC TCAGCATGGC GTGACGCTGT ACGACGAAGC GCCGAAATAC
CCGGCTGATT TCAAGCATTT CGACTACGTG AACCCGGATG CCCCCAAGGG CGGCACGCTG
CGCCAGGCAG GCTTCGGCGG TTTCGACAGT CTCAACCCGT TCATCAACAA GGGCGTACCG
GCAGACGACA TTGGTCTGAT CTACGACACC CTGGCCCGCG CTAGCCTGGA CGAACCCTTC
AGTGAATACG GGCTGGTTGC CGGCAAAATC GAGAAAGCGC CGGACAACAG CTGGGTGCGC
TTCTACCTGC GGCCTGAAGC ACGCTTCCAT GACGGCCACC CGATCCGCGC CGAAGATGTG
GAATTCAGCT TCAAGACCCT GATGGAACAC GGCTCGCCCA TGTACAAGGG CTACTACGCC
GACGTCGATC AGGTCGTCGT CGAAGACCCG CTGCGGGTGC TGTTCAAATT CAAGCACAAG
GGCAGCCGCG AAATGCCGCT GATTCTTGGC CAGTTGCCCG TGCTGCCCAA GCACTTCTGG
GCCGACCGCG ACTTCAGCAA AGGCAACCTG GACTTCCCGC TGGGCAGCGG GCCGTACAAG
GTGGTCGATG TAAAAGCCGG GCGCTCGGTG AGTTATGAGC GGGTCAAGGA TTACTGGGCA
AAGGATTTGC CGATCAACAA GGGTTTCTAC AACTTCGATG TACTGACCAC CGACTACTAC
CGCGACAACA CAGTAGCGCT GGAGGCCGGC AAGGCCGGGC AGTTCGACTA CTGGATAGAG
ACCAGCGCCA AGAACTGGGC GACCGCCTAC AACACCCCGG CAGTTCGCGA TGGCAGGCTG
GTCAAGGAAG AGCTGCCCAA CGGTAACCCG ACCGGTATGC AGGGGTTCGT TTTCAACTTG
CGCAAACCGG TATTCCAGGA CGCGCGGGTG CGCGAAGCGC TGACCTTGCT GCTGGATTTC
GAGTGGACCA ACAAACAGCT TTTCAACGGT GCCTACAGCC GTACCAAAAG TTATTTCGAC
AACTCGGAAA TGGCCTCAAG CGGCCTGCCC TCTGCCGAGG AACTGAAAAT CCTCGAACCG
CTGCGCGGCA AGATTCCGGA TCGGGTATTC ACCGAGGCTT TTCAGTTACC GGTTAACGAC
GGCAGCGGCA TGATTCGCCC ACAACAACGT CGGGCATTCC AGCTGTTGCA GGAAGCGGGC
TGGAAGATCG TCGACGACAA GATGGTCGAC GCGCAGGGCA ACCCGGTAAA ACTGGAGTTT
CTGATCGCCC AGACCGAGTT CGAGCGCATT CTGCTGCCTT ACAAGCGCAA CCTGAGTGAC
CTGGGTATTG AACTGGTGAT CCGCCGGGCC GACGTGTCGC AATACATTAA CCGCCTGCGC
TCGCGGGACT ACGACATGAT CGTCACGGGC TATCCGCAGT CCAGCTCGCC CGGTAACGAA
CAGCGCGTGT ACTTCGACTC CTCCAGCGCC GACAACCCGG GCAGCCGCAA CTTCATGGGC
CTCAAGGACC CTGCGGTGGA CTCTCTCGTC AACGGCCTGA TCAACGCCGA CTCACGGCAA
AGCCTGATCA CCCATACCAA GGCGCTGGAC CGCGTGCTGC TGTGGGGCTT TTACGTCGTC
CCGAACTGGC ACATCAAGAC CTGGCGGGTG GCTTACTGGA ATCACCTCGA CCATCCCAAG
GCCGAAGCGC TTTCCGATAT CGGCCTGATG ACCTGGTGGG CCAAGCCGGA TGTCAAACCG
GTGACCGCGA CCCCGTCAGC CCCTGATCAG GCCAAGCCTG CGAACGCGGA GCAATAA
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| Protein sequence | MNPLHSLRSQ AAGLLLASLA CTVQAAPQHG VTLYDEAPKY PADFKHFDYV NPDAPKGGTL
RQAGFGGFDS LNPFINKGVP ADDIGLIYDT LARASLDEPF SEYGLVAGKI EKAPDNSWVR
FYLRPEARFH DGHPIRAEDV EFSFKTLMEH GSPMYKGYYA DVDQVVVEDP LRVLFKFKHK
GSREMPLILG QLPVLPKHFW ADRDFSKGNL DFPLGSGPYK VVDVKAGRSV SYERVKDYWA
KDLPINKGFY NFDVLTTDYY RDNTVALEAG KAGQFDYWIE TSAKNWATAY NTPAVRDGRL
VKEELPNGNP TGMQGFVFNL RKPVFQDARV REALTLLLDF EWTNKQLFNG AYSRTKSYFD
NSEMASSGLP SAEELKILEP LRGKIPDRVF TEAFQLPVND GSGMIRPQQR RAFQLLQEAG
WKIVDDKMVD AQGNPVKLEF LIAQTEFERI LLPYKRNLSD LGIELVIRRA DVSQYINRLR
SRDYDMIVTG YPQSSSPGNE QRVYFDSSSA DNPGSRNFMG LKDPAVDSLV NGLINADSRQ
SLITHTKALD RVLLWGFYVV PNWHIKTWRV AYWNHLDHPK AEALSDIGLM TWWAKPDVKP
VTATPSAPDQ AKPANAEQ
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