Gene Psyr_1751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1751 
Symbol 
ID3367259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1990043 
End bp1991926 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content58% 
IMG OID637652100 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_234837 
Protein GI66044996 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.348109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0677044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA ATATCAGGGA CAATTCACAA GGCTGGATTG CCAAGACAAT TATCGGACTC 
ATCATCGCCT TGATGGCCTT CACCGGCATC GAAGCGATGT TTACCGCTAC CAGCAACAAA
CAGAACGCAG CTGAAGTCAA CGGCGAGGAC ATCTCTCAGA ATGAGTTGAG CCAGGCCGTG
GACATGCAGC GCCGTCAGTT GGCTCAACAG CTCTCGCAAC AGCTGGGCAA GGATTTCGAT
CCGGCCATGC TGGATGAGAA ACTGTTGCGC GAATCAGCCC TCAAAGGCCT GATCGACCGC
AAGCTGCTGC TGCAAGGCGC GGCGGATGCC AGGTTCTCGT TTTCCGACGC GGCACTGGAT
CAGCAGCTTT TGCAGACGCC TGAGTTTCAG GTGGATGGCA AATTCAACGC AGACCGTTTC
GATCAGGTGA TTCGCCAGCT AGGCTACAGC CGTCTGCAGT TCCGCCAGAT GCTGGGTCAG
GAAATGCTCA TCGGTCAGGT GCGTGCTGGT GTTGCCGGCA GCGCCTTTGT AACCGACGCA
CAGGTTGAAG CCTTTGCACG CCTCGAAAAG CAGACCCGTG ATTTCGCTTC GCTGACCCTG
CCTGCCGATA CCTCGGCGGT CAAAGTGACC GATGACGAAG TCAAGGCTCA CTACGACGAG
CATGCCAAGG AGTTCATGAG CCCTGAGCAG GTCGTACTCG ACTACATCGA ATTGAAGAAG
TCGTCCTTCT TCGACAAGGT GCAGGTCAAG GACGAGGACT TGCAGGCGGC TTATCAGAAG
GAAATCGCCA ATCTGTCCGA ACAGCGTCGT GCGGCACACA TCCTGATCGA AGTGAACGAC
AAGCTGAATG ACGAGCAGGC CAAGGCGAAG ATTGAAGAAA TTCAGCAGCG TCTGGCCAAG
GGTGAGGATT TCGCGGCACT GGCCAAGGAA TACTCGCAGG ACCCTGGTTC GTCGAACAAG
GGCGGTGATC TGGGCTACGC AGGCAAGGGT GTCTATGACC CGGCTTTCGA AGAGGCGCTG
TATGCCTTGA ACAAGGACCA GGTTTCGCAG CCGGTGCGCA CCGACTTCGG CTGGCACCTG
ATCAAGCTGC TGGGCGTTGA AGCACCTTCG GTGCCGAGCT TTGCCAGTCT GAAAGGCAAG
CTGACCAACG ATTTGAAATC GCAGCTGGTC GAGCAGAAGT TTGTCGAAGT GACCAAGCAA
CTGGAAGACT CGGCGTTCGA ATCGTCCGAC CTGTCCCAGC CGGCACAGGA CCTGGGCCTG
AAGGTTCAGA CCACTGCACC GTTCGGTCGT GAAGGCGGCG AAGGCCTGAC GGCCAACCGT
GCGGTCATCC AGGCGGCATT CAGCCCTGAA GTGTTGGAAG AGGGCGCCAA CAGCAATACG
CTGGAGCTGG ATCCGGAAAC CGTTGTGGTG GTGCGCTCCA AAGAGCACCT GCAGCCGCAG
CAGTTGCCAC TTGAGAGCGT TGCCAGCTCG ATTCGCGCTC AACTGGTCAA GGAACATGCT
TCGGCCGCTG CCAAGGCCAA GGGCGAGGCG CTGCTGGCCG GTCTGCGTGA CGGCAAGATC
CCGTTGGCTG CCAAGCAGGA AGGTCGTGAC TGGAAGGTGA TGGAAGCGGT CACGCGCAGT
CAGGAAGGGG TTGACCCTCA AGTGCTGCAG ACGCTGTTCC GCATGCCCAA GCCGACAGGT
AAGGACAAGC CGGAATTCGC CAGCATCACT GCTTCGGATG GCAGCTTCGT GATCGTCCGT
CTCAATGGCG TCAATCAGGC GGCTGCACCG ACTGACGCCG AGAAGGCGCA ATACCGTCGC
TTCCTCTCCT CCCGCGAGGG GCAACAGGAT TTCGCGGCGT ACCGTGCACA GTTGGAAAGC
AAGGCGAAGA TCGAGAAGTT CTAA
 
Protein sequence
MLQNIRDNSQ GWIAKTIIGL IIALMAFTGI EAMFTATSNK QNAAEVNGED ISQNELSQAV 
DMQRRQLAQQ LSQQLGKDFD PAMLDEKLLR ESALKGLIDR KLLLQGAADA RFSFSDAALD
QQLLQTPEFQ VDGKFNADRF DQVIRQLGYS RLQFRQMLGQ EMLIGQVRAG VAGSAFVTDA
QVEAFARLEK QTRDFASLTL PADTSAVKVT DDEVKAHYDE HAKEFMSPEQ VVLDYIELKK
SSFFDKVQVK DEDLQAAYQK EIANLSEQRR AAHILIEVND KLNDEQAKAK IEEIQQRLAK
GEDFAALAKE YSQDPGSSNK GGDLGYAGKG VYDPAFEEAL YALNKDQVSQ PVRTDFGWHL
IKLLGVEAPS VPSFASLKGK LTNDLKSQLV EQKFVEVTKQ LEDSAFESSD LSQPAQDLGL
KVQTTAPFGR EGGEGLTANR AVIQAAFSPE VLEEGANSNT LELDPETVVV VRSKEHLQPQ
QLPLESVASS IRAQLVKEHA SAAAKAKGEA LLAGLRDGKI PLAAKQEGRD WKVMEAVTRS
QEGVDPQVLQ TLFRMPKPTG KDKPEFASIT ASDGSFVIVR LNGVNQAAAP TDAEKAQYRR
FLSSREGQQD FAAYRAQLES KAKIEKF