| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1746 |
|---|
| Symbol | tig |
|---|
| ID | 3367254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1983381 |
|---|
| End bp | 1984691 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637652095 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_234832 |
|---|
| Protein GI | 66044991 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.132696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAA CACTTCCGCT CTTGAGCGCC GCATGACCAT TGGCGTACCT
GCCGAGCGCA TCGAGACTGA AGTCAACAAG CGTCTGCAAC AGACCGCGCG CAAAGCCAAG
ATCCCGGGCT TCCGCCCTGG CAAGGTGCCG ATGAGCGTGA TTCGTCAGCG TTACGAGGAC
GGCGCACGTC AGGAAGCACT GGGCGATCTG ATTCAGGCTA CTTTCTATGA AGCTGTGGTT
GAGCAGAAGC TGAACCCGGC CGGTGCTCCT GCTGTAGAGC CCAAGTCGTT CGAAAAAGGC
AAAGATCTGG AATACGTGGC TACGTTCGAA GTATTCCCGG AATTCACCGT TGCCGGCTTC
GATAGCATCT CCGTAGAGCG CCTGTCTGCC GATGTGGCCG ACAGCGATCT GGACAACATG
CTTGAAGTGC TGCGCAAGCA GAACGTTCGT TTCGAAGTGA CTGATCGTGC TGCCCAGAAC
GAAGACCAGC TGAACATCGA TTTCGTCGGC AAGGTCGACG GTGAAGTGTT CGCTGGCGGT
TCCGCTACCG GCACTCAGCT GGTTCTGGGT TCCGGCCGCA TGATCCCTGG TTTCGAAGAC
GGTCTGGTTG GCGCCAAGGC CGGTGAAGAG CGCGTTCTGA ACGTGACCTT CCCTGAGGAC
TATCAGAACC TCGAGTTGGC CGGCAAGGCT GCCGAGTTCA CCGTGACCGT CAACACCGTG
TCCGAACCAA AGCTGCCTGA GCTGAATGAA GAGTTCTTCA AGCAGTTCGG TATCAAGGAA
ACCGGTATCG AAGGCTTCCG CACCGAAGTT CGCAAGAACA TGGAGCGCGA GCTGCGTCAG
GCGATCAAGT CCAAGGTCAA GAATCAGGTC ATGGACGGTC TGCTGGCCGC CAACCCGATC
GAAGTGCCTA AAGCGCTGCT GGAAAACGAA GTCAACCGTC TGCGTGTGCA GGCCGTTCAG
CAGTTCGGCG GCAACATCAA GCCTGACCAG CTGCCGGCAG AGCTGTTCGA AGAGCAGGCC
AAGCGTCGCG TCGAGCTGGG TCTGATCGTT GCCGAGGTCG TCAAGCAGTT CGACCTCAAG
CCTGATGATG CTCGCGTTCG CGAAATGATT CAGGAAATGG CCTCCGCCTA TCAGGAGCCT
GAGCAGGTCG TAGCCTGGTA CTACAAGAAC GAGCAGCAAA TGAACGAGGT ACGTTCTGTT
GTGCTTGAAG AGCAAGTTGT AGATACTGTT TTGCAGAAAG CTAGCGTGAC CGACAAATCG
GTCTCCTACG AAGAAGCTGT CAAGCCGGTG GAAGCTCCAA AAGCCGACTG A
|
|---|
| Protein sequence | MQVSVENTSA LERRMTIGVP AERIETEVNK RLQQTARKAK IPGFRPGKVP MSVIRQRYED
GARQEALGDL IQATFYEAVV EQKLNPAGAP AVEPKSFEKG KDLEYVATFE VFPEFTVAGF
DSISVERLSA DVADSDLDNM LEVLRKQNVR FEVTDRAAQN EDQLNIDFVG KVDGEVFAGG
SATGTQLVLG SGRMIPGFED GLVGAKAGEE RVLNVTFPED YQNLELAGKA AEFTVTVNTV
SEPKLPELNE EFFKQFGIKE TGIEGFRTEV RKNMERELRQ AIKSKVKNQV MDGLLAANPI
EVPKALLENE VNRLRVQAVQ QFGGNIKPDQ LPAELFEEQA KRRVELGLIV AEVVKQFDLK
PDDARVREMI QEMASAYQEP EQVVAWYYKN EQQMNEVRSV VLEEQVVDTV LQKASVTDKS
VSYEEAVKPV EAPKAD
|
|---|
| |