| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1742 |
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| Symbol | |
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| ID | 3367247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1978373 |
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| End bp | 1980145 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637652088 |
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| Product | ABC transporter, periplasmic substrate-binding protein, putative |
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| Protein accession | YP_234828 |
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| Protein GI | 66044987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.284147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATA AGAAAAACAA GCTGCAACAT AGCGTGACGC TGGCAACCAT GATCATGCTC
AGCGGGTTGA GTGTGTCGGC ATGGGCGGAT CAGTACGAAG ATGCGGCGAA GAAGTGGGCG
GCGAGCGAGT TCAAGCCGAG CACGCTCTCT GATGCCGAGC AGTTGAAAGA GCTGGAGTGG
TTCATCGAAG CGGCCAAGCC GTTTCGTGGC ATGGACATCA AGGTGGTGTC GGAAACCCTG
ACCACCCATG AATACGAGTC CAAGACCCTG GCCAAGGCGT TCACCGAAAT CACCGGTATC
AAAGTCACCC ATGACTTGCT GCAGGAAGGT GATGTCATCG AGAAGCTGCA GACCGCCATG
CAGTCTGACA AAAGCATCTA CGACGGCTGG GTCAACGACT CGGACCTGAT CGGTACGCAC
TTCCGCTACG GCAAGGCCCT GTCTCTGACG GATCTGATGG CCAGTCCGGA AGGCAGTAAA
GTCACCTCGC CGACGCTGGA CCTGAAAGAC TTCATTGGCA CTTCGTTTAC CACTGCTCCA
GACGGCAAGC TTTACCAGCT GCCTGATCAG CAGTTCGCCA ACCTGTACTG GTTCCGTGCC
GACTGGTTCG AGCGTCCTGA TCTGAAAAAG AAATTCAAGG ACAAATACGG TTACGAGCTG
GGTGTTCCGG TCAACTGGTC GGCTTATGAA GACATCGCCA AATTCTTCAG CGAGGACGTC
AAGGAGATCG ACGGCAAGAA AGTCTTCGGG CACATGGACT ATGGCAAGAA AGACCCGTCA
CTGGGCTGGC GTTTCACCGA TGCCTGGTTC TCCATGGCGG GCAGCGGCGA CAAGGGCCTG
CCTAACGGTC TGCCGGTGGA CGAGTGGGGC ATCCGCGTCG AGGATTGCCA TCCGGTCGGT
TCCAGCATCA CCCGCGGTGG CGACACCAAC GGGCCAGCGG CAGTCTTCGC CACGCAGAAA
TACATCGACT GGCTGAAAGC CTATGCACCG CCGGAAGCGG CGGGCATGAC CTTCTCCGAA
TCCGGTCCGG TGCCTTCGCA GGGTAACGTC GCGCAACAGA TCTTCTGGTA CACCGCCTTT
ACCGCCGACA TGACCAAGCC AGGCCTGCCG GTGATGAATG CTGACGGCAC GCCGAAGTGG
CGCATGGCAC CGTCGCCAAA AGGCCCTTAC TGGAAAGAAG GCATGAAGCT CGGCTATCAG
GACGTCGGTT CGTGGACCTT CCTGAAGTCG TCCGACGAGA AAAAACGTTT GGCGGCCTGG
CTGTATGCGC AATTCGTGAC CTCGAAGAGC GTTTCACTGA AGAAAACCAT CGTCGGCCTG
ACGCCGATTC GCGAGTCGGA CATCAACTCC AAGGAAATGA CCGCGCTGGC GCCCAAGCTG
GGTGGTCTGG TGGAGTTCTA TCGCAGCCCG GCCCGCGTGC AATGGTCGCC TACCGGCACC
AACGTGCCTG ACTATCCGAA GCTGGCACAG CTGTGGTGGA GCCATGTGGC CGAGGCGGTC
ACTGGCGAGA AGACTGCGCA GGAGGCCCTC GACGGTCTGG CCAAGGACCA GGATGCGATC
ATGATGCGCA TCCAGCGTTC TGAGGTGCAG GAACCCAGCA AATGTGCACC GAAGATGAAT
AAGGAAACCA CTGCGGAAGT CTGGTACAAG AAGGCCGAAG AGAGCAACGG CGAGTTCCTC
GCGCCACAGC GCAAGCTGGC CAACGAGAAA CCCAAGGGTG AAACCATCGC CTATGCGGAC
TTGCTGAAAA GCTGGGAAGC AGCCAGGAAG TAA
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| Protein sequence | MFNKKNKLQH SVTLATMIML SGLSVSAWAD QYEDAAKKWA ASEFKPSTLS DAEQLKELEW
FIEAAKPFRG MDIKVVSETL TTHEYESKTL AKAFTEITGI KVTHDLLQEG DVIEKLQTAM
QSDKSIYDGW VNDSDLIGTH FRYGKALSLT DLMASPEGSK VTSPTLDLKD FIGTSFTTAP
DGKLYQLPDQ QFANLYWFRA DWFERPDLKK KFKDKYGYEL GVPVNWSAYE DIAKFFSEDV
KEIDGKKVFG HMDYGKKDPS LGWRFTDAWF SMAGSGDKGL PNGLPVDEWG IRVEDCHPVG
SSITRGGDTN GPAAVFATQK YIDWLKAYAP PEAAGMTFSE SGPVPSQGNV AQQIFWYTAF
TADMTKPGLP VMNADGTPKW RMAPSPKGPY WKEGMKLGYQ DVGSWTFLKS SDEKKRLAAW
LYAQFVTSKS VSLKKTIVGL TPIRESDINS KEMTALAPKL GGLVEFYRSP ARVQWSPTGT
NVPDYPKLAQ LWWSHVAEAV TGEKTAQEAL DGLAKDQDAI MMRIQRSEVQ EPSKCAPKMN
KETTAEVWYK KAEESNGEFL APQRKLANEK PKGETIAYAD LLKSWEAARK
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