| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1736 |
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| Symbol | |
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| ID | 3367241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1971971 |
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| End bp | 1973824 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652082 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_234822 |
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| Protein GI | 66044981 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.590224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA CCAGCGCTTC GCTTGCTCAC GACATCATCA TTCAGGATTC ATGGACCCGC
TGCCGGGACT TCGGCCTCAG TCATCAGACG CGTCCCTCAT TCGGCCAATT GCCGGGGACG
GAGGTTTCCA GGCTGCTGGA GCGCCATCAC GGACTGGTAC AGACCACCCA TCAGGAGGTC
CTGCCGGTCT ACGAAAACAT TCTCAGCAAC TCCAGCTGTC TGATTCTGCT GGCCGACCGT
CAAGGTCAGT TGCTCAAGTC ATGGGGTGCA CAACGCTTCG TCGAATCGTC CCAGGCTCAA
GGCTTCATGC CAGGTGCCAG CTGGAACGAA CGCGGCACGG GCACCAACGC CATCGGCACG
GCGCTGGCCT GCGAAGAGGC CATCCATATT GAACCGGACG AGCATTTCCT CAAGGCCAAC
CGTTTCATGA CCGGTTCGGC CTCACCGATC TTCGACGCAG ACAGGCGCAT CATCGCCGTG
CTGGATGTGT CCAGCGACAG CTTCCTGCCA CCCTCGCACA CGCTGGGCAT GGTCAAAATG
ATGAGCCAGT CGGTGGAAAA CCGCCTGATC CTCGACCAGT TTCGCGACTC CCATTTCCAG
CTGATCTTCA ATACCGGCCT GAACAACCTC GACAGCCAAT GGGCTGGCCT GCTGATTTTT
GACGAAAGTG GCCAGATCCT GTGCGCCAAT CGGCGCGCCG ACACCTTGCT GGGGACGGCT
CCGGCCGGTG CCAGCATCGA GACGCTGTTC AAATGTCCGA TCCTGCAATT GCTCAGCGAA
ACCGAAGCGC GTCCGTTTGC GCTGCATGCA TTTGGCAACA ATCGCTTTCA ATGCCTGCTC
AAGCGTCCGA CTCGCAAACC ATTGAAGCTG CATTGCGTCC AGGCTGCGCA GGTGCCTGCT
GCACCACGAA ACCTTGATCT GCAGGCGATC AGCTTGGGCG ATGCGAAGGT CGAGAAGGCT
GTGCGTCAGG CGCAGCGGCT GCTGGAAAAA GACATCCCAC TGCTCATTCA TGGTGAAACC
GGGGTTGGCA AGGAAGTCTT TGTCAAAGCC CTGCATCAGG CCAGTGCGCG CGCCAGCCAG
CCGCTGATCG CGGTCAACTG TGCAGCGATC CCGGCCGATC TGGTCGAGGC CGAGCTGTTT
GGCTATGAAA GAGGCGCCTT CACCGGGGCC AACCAGAAAG GCAGCATCGG CCTGATCCGC
AAGGCCGACA AAGGCACGCT GTTTCTGGAT GAGGTGGGCG ACATGCCGAT GCCGGTACAG
GCGCGATTGC TGCGTGTGCT GCAAGAGCGC TGCGTTCAGC CATTGGGCAG CAGCGAGCTG
TATCCGGTCG ATATACGGCT GATTTCAGCC ACCAACCGGG GTCTGCGCGA TCAGGTCCAG
GCGGGGCTTT TTCGCCAGGA TCTTTATTAT CGGATCAGCG GCCTGAGCAT CGAACTCCCG
CCCCTCCGCG AGCGGACTGA CAAACATGCG CTGATCCAGC GAATCTGGGA GCGGCACCGT
GATGCTCACC AGCGCGCGGG CTTTTCCAGA GAAGTGCTTG AATTATTCGA GCATCACCCC
TGGCCGGGCA ACCTGCGCCA GCTCAACAGC GTGATTCAGG TAGCGCTGGC ACTGGCCGAC
GAACAGCCGA TCGGCACCGA CCATCTGCCC GAGGACTTTC TGCTCGACGC TCACGCGGAT
GAGGAATGCC GTGTCCCGCT CAGGACTCAG GAGTCGGCCA CTCGCTTTCA CTCGAGCGAA
GACCTCGGCC AACTGTTTCA AGCGGCAGGC GGGAATGTTT CACAGTTGGC CAAACGTCTG
GGCGTCAGCC GCAACACACT GTACAAGCGG TTGCGGGAAC AGCGGATCGT TTAG
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| Protein sequence | MSQTSASLAH DIIIQDSWTR CRDFGLSHQT RPSFGQLPGT EVSRLLERHH GLVQTTHQEV
LPVYENILSN SSCLILLADR QGQLLKSWGA QRFVESSQAQ GFMPGASWNE RGTGTNAIGT
ALACEEAIHI EPDEHFLKAN RFMTGSASPI FDADRRIIAV LDVSSDSFLP PSHTLGMVKM
MSQSVENRLI LDQFRDSHFQ LIFNTGLNNL DSQWAGLLIF DESGQILCAN RRADTLLGTA
PAGASIETLF KCPILQLLSE TEARPFALHA FGNNRFQCLL KRPTRKPLKL HCVQAAQVPA
APRNLDLQAI SLGDAKVEKA VRQAQRLLEK DIPLLIHGET GVGKEVFVKA LHQASARASQ
PLIAVNCAAI PADLVEAELF GYERGAFTGA NQKGSIGLIR KADKGTLFLD EVGDMPMPVQ
ARLLRVLQER CVQPLGSSEL YPVDIRLISA TNRGLRDQVQ AGLFRQDLYY RISGLSIELP
PLRERTDKHA LIQRIWERHR DAHQRAGFSR EVLELFEHHP WPGNLRQLNS VIQVALALAD
EQPIGTDHLP EDFLLDAHAD EECRVPLRTQ ESATRFHSSE DLGQLFQAAG GNVSQLAKRL
GVSRNTLYKR LREQRIV
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