Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1734 |
Symbol | |
ID | 3367239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1968763 |
End bp | 1970457 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652080 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_234820 |
Protein GI | 66044979 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.112324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC CCACTCCAGA ACCCGCTGCC CATTCAAAGG CAGGTCCAGC CGTACCGACC AATTTCCTGC GTCCTATCGT GCAGGCAGAC CTGGACTCGG GCAAGCACAG CAAAATCGTG ACCCGCTTTC CGCCGGAGCC CAACGGCTAC CTGCACATCG GTCACGCCAA GTCGATCTGC GTGAACTTCG GTCTGGCCCA GGAGTTCGGT GGCGATACGC ACCTGCGTTT CGATGACACC AACCCGGCCA AGGAAGACCA GGAATACATC GACGCCATCA TGAGTGACGT CAAGTGGCTG GGCTTCGAGT GGGCGGGCGA AGTGCGCTAC GCCTCGCAGT ATTTCGACCA GTTGCACGAC TGGGCGGTCG AGCTGATCAA GGCAGGCAAG GCCTATGTGG ACGATCTGAC CCCCGAGCAG GCGCGCGAAT ATCGCGGCAC CCTGACCGAG CCGGGCAAGA ACAGTCCGTT CCGCGAGCGT AGCGTCGAGG AAAACCTCGA CCTGTTCGCG CGCATGAAAG CCGGTGAGTT CGAGGATGGC GCTCGCGTAC TGCGCGCCAA AATCGACATG GCCTCGCCGA ACATGAACCT GCGTGACCCG ATCATCTACC GCATTCGCCA TGCGCATCAC CATCAGACCG GCGACAAGTG GTGCATCTAT CCGATCTATG ACTTCACCCA CGGTCAGTCG GATGCCCTCG AAGGCATCAC CCACTCGATC TGCACCCTGG AGTTCGAAAG CCATCGTCCG CTGTACGACT GGTTTCTCGA CAACCTGCCG GTGCCGTGCA AGCCGCGTCA GTATGAGTTC TCGCGCCTGA ACCTGAACTA CACCATCACC AGCAAGCGCA AGCTCAAGCA ACTGGTTGAC GAGAAACACG TCAATGGCTG GGATGACCCA CGCATGTCGA CGCTGTCGGG CTTCCGTCGC CGTGGCTACA CGCCCAAATC GATTCGCAAT TTCTGCGAAA TGATCGGCAC CAACCGCTCT GATGGCGTGG TCGATTTCGG CATGCTCGAA TTCAGCATCC GCGACGACCT GGACCACAGC GCGCCGCGCG CCATGTGCGT GCTGCGCCCG CTGAAAGTGG TCATCACCAA CTACCCGGAA GGCCAGGTCG AGAAGCTGGA ACTGCCGCGC CACCCGAAAG AAGATCTGGG CATGCGCGAG CTGCCGTTCT CGCGGGAGCT GTACATCGAT CGCGACGATT ACATGGAAGA GCCGCCGAAG GGCTACAAGC GTCTTGAGCC CAACGGCGAA GTGCGTTTGC GTGGCAGCTA TGTGATCCGT GCCGATGAAG CGATCAAGGA TGCCGACGGC AACATCGTCG AGCTGCGTTG CTCCTACGAC CCGGAAACGT TGGGCAAGAA CCCTGAAGGC CGCAAGGTCA AGGGCGTCGT GCACTGGGTG CCGGCAGCCG AGAGCGTAGA GTGCGAAGTG CGTCTGTACG ATCGTCTGTT CCGTTCGCCG AACCCTGAAA AAGCCGAAGA GGGCGCAAGC TTTCTGGACA ACATCAACCC GGACTCCCTG CAAGTACTGA CCGGTTGTCG CGCCGAGCCT TCATTGGCGC AAGCGCAACC GGAAGACCGT TTCCAGTTCG AACGCGAAGG TTATTTCTGC GCGGACATCA AGGACTCCAG ACCCGGTCGA CCTGTCTTCA ACCGCACCGT GACGTTGCGG GATTCCTGGA CCTGA
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Protein sequence | MSKPTPEPAA HSKAGPAVPT NFLRPIVQAD LDSGKHSKIV TRFPPEPNGY LHIGHAKSIC VNFGLAQEFG GDTHLRFDDT NPAKEDQEYI DAIMSDVKWL GFEWAGEVRY ASQYFDQLHD WAVELIKAGK AYVDDLTPEQ AREYRGTLTE PGKNSPFRER SVEENLDLFA RMKAGEFEDG ARVLRAKIDM ASPNMNLRDP IIYRIRHAHH HQTGDKWCIY PIYDFTHGQS DALEGITHSI CTLEFESHRP LYDWFLDNLP VPCKPRQYEF SRLNLNYTIT SKRKLKQLVD EKHVNGWDDP RMSTLSGFRR RGYTPKSIRN FCEMIGTNRS DGVVDFGMLE FSIRDDLDHS APRAMCVLRP LKVVITNYPE GQVEKLELPR HPKEDLGMRE LPFSRELYID RDDYMEEPPK GYKRLEPNGE VRLRGSYVIR ADEAIKDADG NIVELRCSYD PETLGKNPEG RKVKGVVHWV PAAESVECEV RLYDRLFRSP NPEKAEEGAS FLDNINPDSL QVLTGCRAEP SLAQAQPEDR FQFEREGYFC ADIKDSRPGR PVFNRTVTLR DSWT
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