Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1731 |
Symbol | |
ID | 3367236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1965072 |
End bp | 1966610 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652077 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_234817 |
Protein GI | 66044976 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA ACGCCCCCGC TTCTTTTACC CCGCCAAGCC TGTTGCTGTG CACCATCGGT CTGTCGCTGG CGACCTTCAT GCAGGTGCTC GATACCACGA TTGCCAACGT GGCGCTGCCG ACCATCGCCG GCAACCTGGG CGTCAGCTCA GAGCAGAGCA CCTGGGTGAT CACCTCGTTT GCGGTCAGCA ACGCGATTGC CTTGCCACTG ACCGGCTGGC TCAGTCGCCG CTTCGGTGAG GTCAAGCTGT TCCTGTGGGC CACCATTCTG TTCGTCATCG CTTCGTTTCT GTGCGGCATT TCCCAGTCCA TGCCGGAACT GGTGGGCTTC CGCGCGCTGC AGGGGATGGT CGCCGGGCCG CTGTATCCGA TGAGTCAGAC CCTGCTGATT GCGGTGTACC CGCCCGCCAA AAGGGGCATG GCCCTGGCGT TGCTGGCAAT GGTGACGGTG GTGGCGCCGA TTGCCGGGCC GATCCTCGGT GGCTGGATCA CCGACAGTTA CAGCTGGCCG TGGATCTTCT TCATCAACAT TCCCATCGGT CTGTTCGCTG TGCTGGTAGT GCGTAGCCAG ATGTCCAAAA GACCGGTCAC GACCGCTCGT CAACCGCTGG ACTACATTGG CCTGCTGGCG CTGATCGTCG GTGTGGGCGC GCTGCAGGTA GTGCTCGACA AGGGTAATGA TCTGGACTGG TTCGAGTCGA ACTTCATCAT CTTCGGCTCG CTGATTTCGC TGGTGGCGCT GGTTTTCTTC GTCATCTGGG AAATGACCGA CAAGCACCCG ATCGTCAACC TGCGCCTGTT TGCCTACCGC AATTTCCGCA TCGGCACGCT GGTCATGATC GGCGGCTATT CCGGCTTCTT CGGCATCAAC CTGATATTGC CGCAGTGGTT GCAGACCCAG ATGGGCTATA CCGCGACCTG GGCGGGGCTG GCTGTCGCGC CGATTGGCAT CCTGCCAGTA CTGATGTCGC CCTTTGTCGG CAAGTACGCG CACAAGTTCG ACCTGCGTCT GCTGGCCGGG CTGGCGTTCC TGGCGATGGG GCTGAGCTGC TTCATGCGTG CAGGCTTCAA CACCGACGTG GATTTCGAAC ACGTAGCGAT GGTGCAGCTG TTCATGGGCA TCGGCGTGGC ACTGTTCTTC ATGCCGACCC TGAGCATTCT GCTGTCCGAC CTGCCGCCCG ATCAGATCGC CGATGGCTCC GGACTGGCAA CCTTCCTGCG CACCCTGGGA GGCAGCTTCG CAGCGTCGCT GACCACCTGG ATCTGGATCC GCCGCGCCAA CCAGCATCAT GCCTACCTGA GCGAAAACAT CAGCACCTTC GACCCCGCCA CCCGCCACGC CCTCGACAGC CTGGGCGGCG CCAGCCCGCA AGCCTACGCG CAACTGGAGC AGACCCTCAA CGCACAGGCC TACATGATGT CCACCGTGGA TTACTTCTAC CTGCTGGGCT GGATATTCGC CGGACTGATC CTGCTCGTCT GGCTGGCCAA ACCCCCATTC GCCGCCAAGG CCGGGCCTGC GGCAGGCGGC GGGCACTAG
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Protein sequence | MSNNAPASFT PPSLLLCTIG LSLATFMQVL DTTIANVALP TIAGNLGVSS EQSTWVITSF AVSNAIALPL TGWLSRRFGE VKLFLWATIL FVIASFLCGI SQSMPELVGF RALQGMVAGP LYPMSQTLLI AVYPPAKRGM ALALLAMVTV VAPIAGPILG GWITDSYSWP WIFFINIPIG LFAVLVVRSQ MSKRPVTTAR QPLDYIGLLA LIVGVGALQV VLDKGNDLDW FESNFIIFGS LISLVALVFF VIWEMTDKHP IVNLRLFAYR NFRIGTLVMI GGYSGFFGIN LILPQWLQTQ MGYTATWAGL AVAPIGILPV LMSPFVGKYA HKFDLRLLAG LAFLAMGLSC FMRAGFNTDV DFEHVAMVQL FMGIGVALFF MPTLSILLSD LPPDQIADGS GLATFLRTLG GSFAASLTTW IWIRRANQHH AYLSENISTF DPATRHALDS LGGASPQAYA QLEQTLNAQA YMMSTVDYFY LLGWIFAGLI LLVWLAKPPF AAKAGPAAGG GH
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