Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1726 |
Symbol | |
ID | 3367231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1958920 |
End bp | 1961520 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652072 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_234812 |
Protein GI | 161486734 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGAAG CCTACCGTAA ACATATCGAA GAGCGTGCCG CCCAGGGCAT CGTGCCCCAG CCGCTTAACG CCGAACAAAC TGCAGGCCTG GTCGAGCTGC TGAAGAATCC CCCGGCTGGC GAAGAAGCTT TCCTTGTCGA TCTGATCACC AATCGCGTTC CGCCAGGCGT TGACGAAGCT GCCTACGTCA AGGCCGGTTT CCTGTCTGCC CTGGCCAAGG GCGAAGCCAC TTCTCCCCTG ATCGACAAAA AACGCGCTAC CGAACTGCTC GGCACCATGC AAGGTGGCTA CAACATCGTC ACCCTGGTTG AACTGCTCGA CGACGCCACC CTCGCGCCAG TCGCTGCCGA ACAACTCAAG CACACCCTGC TGATGTTCGA CGCCTTCCAC GACGTGGCCG AAAAAGCCAA GAACGGCAAT GCCCACGCCA AGGCTGTGCT GCAGTCCTGG GCTGACGGCG AGTGGTTCAA GAAGCGCCCG ACGCTGGCCG ACAAGATCAG CCTGCGCGTC TTCAAGGTCA CCGGCGAAAC CAACACCGAC GACCTGTCCC CTGCCCCTGA TGCCTGGTCG CGTCCGGACA TCCCGCTGCA CGCCCTGGCC ATGCTGAAAA TGGCCCGTGA CGGCATCGTC CCTGACGTTC AGGGCGCCAT CGGCCCGATG AAGCAGATCG AAGAAATGCG CGGTCAGGGC TTCCCGATTG CCTACGTCGG TGACGTGGTC GGTACCGGTT CCTCGCGTAA ATCGGCAACC AACTCGGTAC TCTGGTTCTT CGGCGACGAC GTCCCTTACG TCCCGAACAA GCGTGCCGGC GGTTTCTGCT TCGGCAGCAA AATTGCTCCG ATCTTCTACA ACACCATGGA AGATGCCGGC GCTCTGCCAA TCGAATTCGA TGTCTCGAAC ATCAACATGG GTGACGTGAT CGACGTCTAC CCCTACGCCG GCAAGGTCTG CAAGCACGAC AGCGACGAAG TCATCACCAC CTTCGAAATG AAGACCCCGG TGCTGCTCGA CGAAGTCCGC GCTGGCGGCC GTATTCCGCT GATCATCGGT CGTGGCCTGA CCAGCAAGGC GCGCGCCGAA CTGGGCCTGC CGGAGTTCGA CCTGTTCAAG ACCCCTGACC AGCCAGCCGA AAGCACCAAG GGTTACACCC TGGCGCAGAA GATGGTCGGC AAGGCATGCG GCGTAGCGGG CGTTCGTCCG GGCACCTACT GCGAACCGAA GATGACCACC GTCGGCTCCC AGGACACCAC TGGCCCGATG ACCCGCGACG AACTGAAAGA CCTGGCGTGC CTGGGCTTCT CGACCGATCT GGTCATGCAG TCGTTCTGCC ACACCGCGGC CTATCCGAAG CCGATCGACG TCAAGACGCA CCACACGCTG CCTGACTTCA TCATGACCCG CGGTGGCGTT TCCCTGCGTC CGGGCGACGG CATCATCCAC AGCTGGCTGA ACCGCATGCT GCTGCCGGAC ACCGTCGGCA CCGGTGGCGA CTCGCACACC CGCTTCCCGA TCGGTATCTC CTTCCCGGCC GGTTCCGGCC TGGTGGCGTT CGCTGCTGCA ACGGGCGTCA TGCCGCTGGA CATGCCTGAA TCGATCCTGG TTCGCTTCAA GGGCAAGATG CAACCTGGCA TCACCCTGCG CGACCTGGTT CACGCCATTC CTTACTACGC GATTCAGGCT GGCCTGCTGA CCGTAGAGAA GAAAGGCAAG AAGAACGCAT TCTCCGGTCG CATCCTGGAG ATCGAAGGCC TCGACAACCT GAGCATCGAA CAGGCTTTCG AGCTGTCCGA CGCCTCTGCC GAGCGTTCGG CTGCCGGTTG CACCATCAAG CTGGCCAAAG AGCCGATCAT CGAATACCTG AATTCGAACA TCACCCTGCT GCGCTGGATG ATCGAACAGG GTTACGGTGA TCCTCGCACC CTGGAGCGTC GTGCTCAGGC GATGGAAGCC TGGGTTGCCA ACCCGGAGCT GCTGGAAGCC GACAAGGACG CCGAGTACGC CGAAATCATC GAAATCGATC TGGCCGACGT CAAGGAGCCT GTGCTCTGCG CGCCGAACGA CCCGGACGAT GCCCGCCTGC TGTCTTCGGT ACAGGGCGAG AAGATCGACG AAGTGTTCAT CGGTTCGTGC ATGACCAACA TCGGCCACTT CCGCGCTGCG GGCAAGTTGC TGGATCAGGT CAAGGGCCAG CTGCCAACGC GTCTGTGGCT GTCGCCACCG ACCAAGATGG ATGCTCACCA ACTGACCGAA GAAGGCTACT ACGGCATCTA TGGCAAGGCT GGCGCACGCA TGGAAATGCC GGGCTGCTCG CTGTGCATGG GTAACCAGGC ACGCGTTGAA CCGAACGCGA CCGTGGTGTC GACCTCGACC CGTAACTTCC CGAACCGTCT GGGTGACGGC GCGAACGTCT ACCTGGCCTC GGCCGAGCTG GCGTCCGTTG CCTCGATTCT GGGTCGTCTG CCGACGGTCG AAGAGTACAT GGGCTACGCC AATCAGATCG ACACCATGGC AGCGGACGTG TACCGCTACC TGAGCTTCGA TCAGATCGCC GAGTTCCGTG AAGCCGCAGC GAACGCCAAC ATCCCGGCCG TTCAAGTGTA A
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Protein sequence | MLEAYRKHIE ERAAQGIVPQ PLNAEQTAGL VELLKNPPAG EEAFLVDLIT NRVPPGVDEA AYVKAGFLSA LAKGEATSPL IDKKRATELL GTMQGGYNIV TLVELLDDAT LAPVAAEQLK HTLLMFDAFH DVAEKAKNGN AHAKAVLQSW ADGEWFKKRP TLADKISLRV FKVTGETNTD DLSPAPDAWS RPDIPLHALA MLKMARDGIV PDVQGAIGPM KQIEEMRGQG FPIAYVGDVV GTGSSRKSAT NSVLWFFGDD VPYVPNKRAG GFCFGSKIAP IFYNTMEDAG ALPIEFDVSN INMGDVIDVY PYAGKVCKHD SDEVITTFEM KTPVLLDEVR AGGRIPLIIG RGLTSKARAE LGLPEFDLFK TPDQPAESTK GYTLAQKMVG KACGVAGVRP GTYCEPKMTT VGSQDTTGPM TRDELKDLAC LGFSTDLVMQ SFCHTAAYPK PIDVKTHHTL PDFIMTRGGV SLRPGDGIIH SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SILVRFKGKM QPGITLRDLV HAIPYYAIQA GLLTVEKKGK KNAFSGRILE IEGLDNLSIE QAFELSDASA ERSAAGCTIK LAKEPIIEYL NSNITLLRWM IEQGYGDPRT LERRAQAMEA WVANPELLEA DKDAEYAEII EIDLADVKEP VLCAPNDPDD ARLLSSVQGE KIDEVFIGSC MTNIGHFRAA GKLLDQVKGQ LPTRLWLSPP TKMDAHQLTE EGYYGIYGKA GARMEMPGCS LCMGNQARVE PNATVVSTST RNFPNRLGDG ANVYLASAEL ASVASILGRL PTVEEYMGYA NQIDTMAADV YRYLSFDQIA EFREAAANAN IPAVQV
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