Gene Psyr_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1726 
Symbol 
ID3367231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1958920 
End bp1961520 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content61% 
IMG OID637652072 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_234812 
Protein GI161486734 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGAAG CCTACCGTAA ACATATCGAA GAGCGTGCCG CCCAGGGCAT CGTGCCCCAG 
CCGCTTAACG CCGAACAAAC TGCAGGCCTG GTCGAGCTGC TGAAGAATCC CCCGGCTGGC
GAAGAAGCTT TCCTTGTCGA TCTGATCACC AATCGCGTTC CGCCAGGCGT TGACGAAGCT
GCCTACGTCA AGGCCGGTTT CCTGTCTGCC CTGGCCAAGG GCGAAGCCAC TTCTCCCCTG
ATCGACAAAA AACGCGCTAC CGAACTGCTC GGCACCATGC AAGGTGGCTA CAACATCGTC
ACCCTGGTTG AACTGCTCGA CGACGCCACC CTCGCGCCAG TCGCTGCCGA ACAACTCAAG
CACACCCTGC TGATGTTCGA CGCCTTCCAC GACGTGGCCG AAAAAGCCAA GAACGGCAAT
GCCCACGCCA AGGCTGTGCT GCAGTCCTGG GCTGACGGCG AGTGGTTCAA GAAGCGCCCG
ACGCTGGCCG ACAAGATCAG CCTGCGCGTC TTCAAGGTCA CCGGCGAAAC CAACACCGAC
GACCTGTCCC CTGCCCCTGA TGCCTGGTCG CGTCCGGACA TCCCGCTGCA CGCCCTGGCC
ATGCTGAAAA TGGCCCGTGA CGGCATCGTC CCTGACGTTC AGGGCGCCAT CGGCCCGATG
AAGCAGATCG AAGAAATGCG CGGTCAGGGC TTCCCGATTG CCTACGTCGG TGACGTGGTC
GGTACCGGTT CCTCGCGTAA ATCGGCAACC AACTCGGTAC TCTGGTTCTT CGGCGACGAC
GTCCCTTACG TCCCGAACAA GCGTGCCGGC GGTTTCTGCT TCGGCAGCAA AATTGCTCCG
ATCTTCTACA ACACCATGGA AGATGCCGGC GCTCTGCCAA TCGAATTCGA TGTCTCGAAC
ATCAACATGG GTGACGTGAT CGACGTCTAC CCCTACGCCG GCAAGGTCTG CAAGCACGAC
AGCGACGAAG TCATCACCAC CTTCGAAATG AAGACCCCGG TGCTGCTCGA CGAAGTCCGC
GCTGGCGGCC GTATTCCGCT GATCATCGGT CGTGGCCTGA CCAGCAAGGC GCGCGCCGAA
CTGGGCCTGC CGGAGTTCGA CCTGTTCAAG ACCCCTGACC AGCCAGCCGA AAGCACCAAG
GGTTACACCC TGGCGCAGAA GATGGTCGGC AAGGCATGCG GCGTAGCGGG CGTTCGTCCG
GGCACCTACT GCGAACCGAA GATGACCACC GTCGGCTCCC AGGACACCAC TGGCCCGATG
ACCCGCGACG AACTGAAAGA CCTGGCGTGC CTGGGCTTCT CGACCGATCT GGTCATGCAG
TCGTTCTGCC ACACCGCGGC CTATCCGAAG CCGATCGACG TCAAGACGCA CCACACGCTG
CCTGACTTCA TCATGACCCG CGGTGGCGTT TCCCTGCGTC CGGGCGACGG CATCATCCAC
AGCTGGCTGA ACCGCATGCT GCTGCCGGAC ACCGTCGGCA CCGGTGGCGA CTCGCACACC
CGCTTCCCGA TCGGTATCTC CTTCCCGGCC GGTTCCGGCC TGGTGGCGTT CGCTGCTGCA
ACGGGCGTCA TGCCGCTGGA CATGCCTGAA TCGATCCTGG TTCGCTTCAA GGGCAAGATG
CAACCTGGCA TCACCCTGCG CGACCTGGTT CACGCCATTC CTTACTACGC GATTCAGGCT
GGCCTGCTGA CCGTAGAGAA GAAAGGCAAG AAGAACGCAT TCTCCGGTCG CATCCTGGAG
ATCGAAGGCC TCGACAACCT GAGCATCGAA CAGGCTTTCG AGCTGTCCGA CGCCTCTGCC
GAGCGTTCGG CTGCCGGTTG CACCATCAAG CTGGCCAAAG AGCCGATCAT CGAATACCTG
AATTCGAACA TCACCCTGCT GCGCTGGATG ATCGAACAGG GTTACGGTGA TCCTCGCACC
CTGGAGCGTC GTGCTCAGGC GATGGAAGCC TGGGTTGCCA ACCCGGAGCT GCTGGAAGCC
GACAAGGACG CCGAGTACGC CGAAATCATC GAAATCGATC TGGCCGACGT CAAGGAGCCT
GTGCTCTGCG CGCCGAACGA CCCGGACGAT GCCCGCCTGC TGTCTTCGGT ACAGGGCGAG
AAGATCGACG AAGTGTTCAT CGGTTCGTGC ATGACCAACA TCGGCCACTT CCGCGCTGCG
GGCAAGTTGC TGGATCAGGT CAAGGGCCAG CTGCCAACGC GTCTGTGGCT GTCGCCACCG
ACCAAGATGG ATGCTCACCA ACTGACCGAA GAAGGCTACT ACGGCATCTA TGGCAAGGCT
GGCGCACGCA TGGAAATGCC GGGCTGCTCG CTGTGCATGG GTAACCAGGC ACGCGTTGAA
CCGAACGCGA CCGTGGTGTC GACCTCGACC CGTAACTTCC CGAACCGTCT GGGTGACGGC
GCGAACGTCT ACCTGGCCTC GGCCGAGCTG GCGTCCGTTG CCTCGATTCT GGGTCGTCTG
CCGACGGTCG AAGAGTACAT GGGCTACGCC AATCAGATCG ACACCATGGC AGCGGACGTG
TACCGCTACC TGAGCTTCGA TCAGATCGCC GAGTTCCGTG AAGCCGCAGC GAACGCCAAC
ATCCCGGCCG TTCAAGTGTA A
 
Protein sequence
MLEAYRKHIE ERAAQGIVPQ PLNAEQTAGL VELLKNPPAG EEAFLVDLIT NRVPPGVDEA 
AYVKAGFLSA LAKGEATSPL IDKKRATELL GTMQGGYNIV TLVELLDDAT LAPVAAEQLK
HTLLMFDAFH DVAEKAKNGN AHAKAVLQSW ADGEWFKKRP TLADKISLRV FKVTGETNTD
DLSPAPDAWS RPDIPLHALA MLKMARDGIV PDVQGAIGPM KQIEEMRGQG FPIAYVGDVV
GTGSSRKSAT NSVLWFFGDD VPYVPNKRAG GFCFGSKIAP IFYNTMEDAG ALPIEFDVSN
INMGDVIDVY PYAGKVCKHD SDEVITTFEM KTPVLLDEVR AGGRIPLIIG RGLTSKARAE
LGLPEFDLFK TPDQPAESTK GYTLAQKMVG KACGVAGVRP GTYCEPKMTT VGSQDTTGPM
TRDELKDLAC LGFSTDLVMQ SFCHTAAYPK PIDVKTHHTL PDFIMTRGGV SLRPGDGIIH
SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SILVRFKGKM
QPGITLRDLV HAIPYYAIQA GLLTVEKKGK KNAFSGRILE IEGLDNLSIE QAFELSDASA
ERSAAGCTIK LAKEPIIEYL NSNITLLRWM IEQGYGDPRT LERRAQAMEA WVANPELLEA
DKDAEYAEII EIDLADVKEP VLCAPNDPDD ARLLSSVQGE KIDEVFIGSC MTNIGHFRAA
GKLLDQVKGQ LPTRLWLSPP TKMDAHQLTE EGYYGIYGKA GARMEMPGCS LCMGNQARVE
PNATVVSTST RNFPNRLGDG ANVYLASAEL ASVASILGRL PTVEEYMGYA NQIDTMAADV
YRYLSFDQIA EFREAAANAN IPAVQV