Gene Psyr_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1725 
Symbol 
ID3367230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1958069 
End bp1958605 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content60% 
IMG OID637652071 
Producthypothetical protein 
Protein accessionYP_234811 
Protein GI66044970 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.113656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGG ACGCCTTTGC TGCGGCCCTT GGTAAAGGAG CAAGCCTGCA TAAACCGCGC 
TTTCTCGAAG CGTTGCGCAC GGGCCTCATA TTCGGCGCCA TCGAAACCAT CACGCCGGTC
ATCGGCTGGG GCATTGGCCA GGTGGCTGCG CGCTTCGCCG AGAGCTGGGA TCACTGGATC
GCCTTCACCC TGTTGCTGGT GCTCGGCCTG CACATGATCT ACAACGGCAT CAAGCACGAC
GATGACGAAG AGCAGGAAAA GCCGGGGCAG CATTCTTTCT GGATTCTCGC CGTCACCGCA
TTCGCCACCA GTATCGATGC ACTGGCGGTC GGCGTAGGCC TGGCGTTTGT CGACGTCAAT
ATCGTGGTTG CCGCCCTGGC CATCGGCTTG GCGACCACGG TCATGGTCAC CATCGGCGTG
ATGCTGGGCC GGGTGCTGGG CACCATGGTC GGCAAACGCG CTGAAATCAT TGGCGGTATC
GTGTTGATCG TGGTGGGTGC GACGATTCTT TATGAGCATT TGTCGGCGGC GCAGTAA
 
Protein sequence
MSTDAFAAAL GKGASLHKPR FLEALRTGLI FGAIETITPV IGWGIGQVAA RFAESWDHWI 
AFTLLLVLGL HMIYNGIKHD DDEEQEKPGQ HSFWILAVTA FATSIDALAV GVGLAFVDVN
IVVAALAIGL ATTVMVTIGV MLGRVLGTMV GKRAEIIGGI VLIVVGATIL YEHLSAAQ