Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1718 |
Symbol | |
ID | 3367223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1947945 |
End bp | 1949003 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637652064 |
Product | von Willebrand factor, type A |
Protein accession | YP_234804 |
Protein GI | 66044963 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.060135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGT TCGCCTGGCC GTGGGCTTTC GTGCTGCTGC CATTGCCGTG GCTGATGCGC GCCCTGCTGC CCATGGCCGA CAGCGGCGAG CCGGCGCTCA AGGTCAGCTT TCTCAGTGAA CTCGAAGGCC TGAGCGGTCG CCGCGCCAAA GCCAATCTGC CGGTCTGGAG ACAGCGTGCG CCGTTTCTGT TGATCTGGCT GTTGCTGCTG ATCACCACAG CGCGACCGCA GTGGCTGGGC GAGCCACTGC CGGTCGCCGC CAGTGGCCGC GACCTGCTGG TGGCGGTCGA CGTGTCCGGG TCGATGGACT ACCCGGACAT GCAATGGAAA AGCGATGAAG TCAGCCGACT GGTGCTGGTG CAACAACTGC TCGGTGACTT TCTCGAGGGC CGCAAGGGCG ACAGGGTCGG CCTGATCCTG TTCGGCACCC AGGCGTTTGT CCAGGCGCCA CTCACCTATG ACCGCCGCAC CGTGCGGGTC TGGCTCGACG AGGCGAGGAT AGGCATTGCC GGCAAGAACA CTGCGCTGGG CGATGCGATC GGCCTGGCCC TGAAACGTCT GCGTATGCGT CCGGCCACCA GTCGTGCGCT GGTGCTGGTC ACCGACGGCG CCAACAACGC CGGTCAGATC GATCCGGTCA CCGCTGCACG ACTGGCTGCC GAAGAAGGCG TAAAAATCTA CGCCATCGGC ATCGGCTCGG ACCCGGACAA AGACGCGCTG CAAAGCGTGC TGGGCCTCAA CCCCAGCCTT GATCTGGACG AACCGACGCT CAAGGAAATC GCCAGCCTCA GCGGTGGCCA GTACTTCCGC GCGCGCGATG GCGACCAGCT GGAAAAGATC CGCGCCACCC TCGATGCCTT GGAGCCGGTT GCACAGCAGC CCACCCAGGC GCGCCCGGCG CAAGCGCTTT ATCAATGGCC ACTGGCGACA GCCCTGTTGT TGAGTGTGCT GCTGGTGCTG CGCGAGTTAT GGCCGAACAA CGCACTGCAA CGCCTGCTGG CGGTGGTGCG TTCCATCAAC TGGCGCGAGC GCTGCAAAAG CCTGTGGAGG TCGCGATGA
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Protein sequence | MFEFAWPWAF VLLPLPWLMR ALLPMADSGE PALKVSFLSE LEGLSGRRAK ANLPVWRQRA PFLLIWLLLL ITTARPQWLG EPLPVAASGR DLLVAVDVSG SMDYPDMQWK SDEVSRLVLV QQLLGDFLEG RKGDRVGLIL FGTQAFVQAP LTYDRRTVRV WLDEARIGIA GKNTALGDAI GLALKRLRMR PATSRALVLV TDGANNAGQI DPVTAARLAA EEGVKIYAIG IGSDPDKDAL QSVLGLNPSL DLDEPTLKEI ASLSGGQYFR ARDGDQLEKI RATLDALEPV AQQPTQARPA QALYQWPLAT ALLLSVLLVL RELWPNNALQ RLLAVVRSIN WRERCKSLWR SR
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