Gene Psyr_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1704 
Symbol 
ID3367209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1914095 
End bp1918063 
Gene Length3969 bp 
Protein Length1322 aa 
Translation table11 
GC content57% 
IMG OID637652050 
Productamino acid adenylation 
Protein accessionYP_234790 
Protein GI66044949 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.410435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTT TTGAGAAAAA TAATACCGCA CCGTCACGCT CTCAAGATCT CGCTATGCGG 
GCCGGCGCAC AGCATATAAC CGGTACTGAA GGGCCACTCT CCATGTCTCA GGAGCAAGCC
TGGTTTCTTG AGACGTTAGT ACCAGAGAGT ATTGCTTATA ACTTTCAGGC CATGCTGAAC
ATTCGCGGCA ACCTTGATAT CAACGTGCTT GAACGTGCGC TGAACAGGGT GGTTGAACGC
CATCAGTCAC TGTCCACTGT TTTTGATGAG GTTGACGGAG AACCACGGCA AACTATCCAG
GACGCCTGGT CCGTGAACAT TCCGATCGTT GACCTGTCTG CCAGCAGTGA AGCGGTACGG
CAGACCTACA TGAATTCTAT TGTGAAAGCT GAAATTGCCC AGAAGATCGA AGTGGCGAAA
CTTCCGCTGA TTCGCTGGGT ACTGTTCAAA TTCAGCGATC AGTTCCACGT ATTGCTGCAT
ATCGAACACC ACCTCATTCA TGACGGCTGG TCATTCCGGC TGTTTCTCAA AGAGCTGAAT
CATTTTTACA ATGAAGAAAA GGGCCGCGCG AATCAGGAGC CCCTTGAGCC GGTGATCCAG
TTCATCGATT ACTGCCAATG GGAGCGCGAC TGGCTGGATT CGGCTGAAGG CCGTCAAGGC
CGAGACTTCT GGTACGGACG TCTTGAAACC TGGCCGGCCT ACACGCATTC GCCGTTTCCG
GCAGAGAAGG ACGCGCAAGC CGCATTGGAT TTTGTCGGAA GTTCGGTGTC GGTGCCGTTG
CCGGGTAAGT TGATCAGCGC ACTGCAGGCG TATGGGTCGG AAAATAAATC CACCCTGTTC
GAGACCATGT TTTCGCTGTT TGCCTGCGTG GTAGCGGCGC GTTCGGGTCA GACGCAACAG
CTGATAGGCA CCGCCGTCGC CAACCGTGAC TTGCCGGGCA TCGAAAACAC CATCGGTATG
CTGGTCAACA TGTTGCCGCT GCGCATCGAC ATTGATGCGA ATACGTCCTG GGCGCCTCTA
CTGGCAGCCG TGAAAGAAGA AATCCGCACG GCTTGCCTGC AGTCGCATGT ACCGTTTTCA
ACAATGGTTG CCGATCTGAG TCCGGATCGT GTCACTCAGC AATTGCCGTA CATCCAGGTT
GCTTTCAGCT TTCATAACTC CATGTCCCGC ACCCTGGACT TTGCGGACAT TGATGTCGAG
GTGGTGGAAG GGCTGGCAAA CGGTTCTGCG AAATTCGACC TCAACGTCAT TTGCGTTTTC
GATGACGAAG TGAACCCGGC CGCTGGTGGT CGCTTCATGC TTGAGTACTC CACCGCTGTC
GCCAAAGAAG CAGATGTCAG AGCGCTGATG GCCGATTTTC TTCACCTGGC TGGCGCCTGG
CTCGAGCAAC CTGCAGAAAG TCTCGCCAAT GTACGCAAGT CTGCTGTGCT GGCCGCGCCG
TCAGGCAGTT CTTCTGTCAA TCCTGGTATG GAATTCTGGA AACAATCACT CGACCTCGAA
GCTTCGGGGC TTCTGCCTGA CCATGCGCTT AATCGCGCAG TCAGCGGGCC GCTTGCGCGT
CATGAAATCC CTCTTCCGGA TGAAAGCCTT GCGCGCCTGT TTCAAGCGTG TGAGCAGCGC
AACATTGAAC CTGAAGCAGC GCTTTTTTCT CTCTATGCCG TGACCATGGC TCGTTATGGC
GGGCATCAAA CCGTCGTGGC CGGTCTGGGT ACTGCTGCCG ATGGACAGCG TCTGGCCATA
CCGTTGCCAC TCAAGTTGAC GCTCGCTGCG CATGACACGT TTGCCGATGT CTTCCTGCGC
GCACAACAGC ACTGCGAGCA GGCTCGTCAC TGGCACGCAT CTTCTGCCCA GGGTCTGGAA
CAAGCGCTTG ATGACAGTGT TGCGGCCTCG GGAAGAGCGC CGCAGTCATT GATACAGTCG
GTATTCTGCG ACGGTGTTTC CGCGCGTGCA GAGCAGGGAG GCGCGTCGGG CAGTCTGCAC
TCGCCTCTCG AATTCGTCCT GGACCGTTCC AGCACAAAGG CCTCGTTGTC ACTCGGCTAT
GCTGCTGATC TGTTCGCTCA GGAAACAGCC ACTTCAATGG CCGGGCATTA CGTCCAGTTG
CTGGAAAAGG CCAGCGAATC ACTGGACGAA ACGCTGGCGC AAAGTCTATC GGCCCAGCAC
CAGGCTGCCA TTCAGACACA GTGTGAAGGG CTTGACTCGA GCTATCCTGA AACGTCCCTG
CACGCCATCG TCGAGGCCTT TGCGGCCATA CAGCCCGAGG CCATCGCTGT GCGGTGCGGC
GATGCAGTGC TGACGTACGC TCAGCTCAAT GAATCCGCCG ACAAAGTTGC TGACACATTG
CTTCGCAAGG GCGTGCAGCC GGGTGACGTC GTGGGCATCT GCATGATGCG CTCCGAATTG
CTGGTTGCGG CGCTGTTGGG CGTGCTCAAG GCCGGTGCAT GCTACCTCTC GATCGACTGT
GCATTGCCTG CAGAGCGTCG TAATTGGCTT CTGGAGGAGG CGGACGTCAA GTGGGCACTG
ATCGATGAGA GTGCTCCGGC TTTACGTGAT GCAACCTCAA CACTGTTGAT AGGGCAATTG
GTGAATGAGC AGGACGACCC ACGCGTGTCG CCGCTGGCCA AACCTGTCAT CAGCGCGGAT
GCTCGCTGCT ATTACATGTT TACATCGGGT TCCACGGGCA CTCCGAAGGC CACGGCCAGT
ACCCACCGCG CGGTGGTGAG TCTGGTCAAG GGTACGGACT ATATCGATAT CAAGGGTGAC
GACCGCTTCC TGTTTTTCGC GCCCCTCGCG TTCGATGCGT CGACCTTTGA AATCTGGGGC
GCCTTGCTGA ACGGCGCGCA GTTGGTGGTT CAGCCTGGCG AAGCCGGCGG ACTGGATGAC
CTGGCACACA CACTGGAAAA TCAGCAGGTC AGTGTGCTCT GGCTGACGTC CGCATTGTTC
CAGGAGATGG TCGATCAATA TCCTCAGGCG ATGGCTGGCG TGAGGCATGT ACTGACCGGC
GGTGACGTTG TTTCGCCGCA AAGCATGCGC AGTTTGCTGG CACGCTCCAC CGGGACGCTC
ACCATCTGTT ACGGCCCGAC TGAAGGCACG GTCTTTACCA CGGCCTACAG CATGGACAAG
GTCGAACAAG TGACTGACAA ACCCTTGATC GGATGGCCGA TTGCACAGGC CGATGCCTAC
ATCGTGGATG TTTTCGGGCA GCTTGCCGAG CCCGGTGTTC CAGGGGAGTT ATTCATCGGC
GGCACAGGGA TCACCGGTGC CTACCTCAAG CGTCCGGAAC TGAGCCAGGA GCGGTTTGTG
ACGCTGGAGC GGTTCCCCGG CAAAACACTC TTCCGCACCG GTGATCTGGC GCGCTGGACC
CCGGGCCGCG GTATCGAGTT CCTTGGACGC AGTGACAGTC AGATAAAGAT CCGTGGGTTG
CGTATAGAAC CGGGTGAGGT CGAGCAGGCG ATACGTCAAT TGCCGGGTGT CACAGCGTGC
TCACTGATTC TGCGCACATT GAACCTGGAC AAACAGCTGG TCGCCTTCGT CAGTCTGGAC
GGCAGCGTTG CACTGGATGA GCAACAGATT CGTGTGGCGT TGAGAGAATG CCTGCCCGAC
TACATGGTGC CTGCCGAAGT GCATGTGATC GAGCAACTGC CGGTCAATGC GAGCGGCAAG
GTCGACAAGC GTGCCTTGCT TGAACTGGCG ACTCAAAACG GCCGTGCAAG GGTTACCAGC
GAGCGACCGT CGACGGCTCT GGAAAAATCC ATTGCCGAGG TCTGGGCGCA CATCCTCAAC
GTGCCGGACG TGGGTAGAAA TGAAGACTTC TTCTCCATCG GCGGACACTC GTTGGCCGGT
ATGCGGATCA TGTCGAGGCT GAGCAAGCAA TTTGGCACTC GTCTGTCGCT GAATCTGCTC
TTCGAGTATC CCAGCGTCGA GACGCTTGCA GGTGCTATCG AACGCTCGGC CGAGCCGTTG
ACGGCCTGA
 
Protein sequence
MNSFEKNNTA PSRSQDLAMR AGAQHITGTE GPLSMSQEQA WFLETLVPES IAYNFQAMLN 
IRGNLDINVL ERALNRVVER HQSLSTVFDE VDGEPRQTIQ DAWSVNIPIV DLSASSEAVR
QTYMNSIVKA EIAQKIEVAK LPLIRWVLFK FSDQFHVLLH IEHHLIHDGW SFRLFLKELN
HFYNEEKGRA NQEPLEPVIQ FIDYCQWERD WLDSAEGRQG RDFWYGRLET WPAYTHSPFP
AEKDAQAALD FVGSSVSVPL PGKLISALQA YGSENKSTLF ETMFSLFACV VAARSGQTQQ
LIGTAVANRD LPGIENTIGM LVNMLPLRID IDANTSWAPL LAAVKEEIRT ACLQSHVPFS
TMVADLSPDR VTQQLPYIQV AFSFHNSMSR TLDFADIDVE VVEGLANGSA KFDLNVICVF
DDEVNPAAGG RFMLEYSTAV AKEADVRALM ADFLHLAGAW LEQPAESLAN VRKSAVLAAP
SGSSSVNPGM EFWKQSLDLE ASGLLPDHAL NRAVSGPLAR HEIPLPDESL ARLFQACEQR
NIEPEAALFS LYAVTMARYG GHQTVVAGLG TAADGQRLAI PLPLKLTLAA HDTFADVFLR
AQQHCEQARH WHASSAQGLE QALDDSVAAS GRAPQSLIQS VFCDGVSARA EQGGASGSLH
SPLEFVLDRS STKASLSLGY AADLFAQETA TSMAGHYVQL LEKASESLDE TLAQSLSAQH
QAAIQTQCEG LDSSYPETSL HAIVEAFAAI QPEAIAVRCG DAVLTYAQLN ESADKVADTL
LRKGVQPGDV VGICMMRSEL LVAALLGVLK AGACYLSIDC ALPAERRNWL LEEADVKWAL
IDESAPALRD ATSTLLIGQL VNEQDDPRVS PLAKPVISAD ARCYYMFTSG STGTPKATAS
THRAVVSLVK GTDYIDIKGD DRFLFFAPLA FDASTFEIWG ALLNGAQLVV QPGEAGGLDD
LAHTLENQQV SVLWLTSALF QEMVDQYPQA MAGVRHVLTG GDVVSPQSMR SLLARSTGTL
TICYGPTEGT VFTTAYSMDK VEQVTDKPLI GWPIAQADAY IVDVFGQLAE PGVPGELFIG
GTGITGAYLK RPELSQERFV TLERFPGKTL FRTGDLARWT PGRGIEFLGR SDSQIKIRGL
RIEPGEVEQA IRQLPGVTAC SLILRTLNLD KQLVAFVSLD GSVALDEQQI RVALRECLPD
YMVPAEVHVI EQLPVNASGK VDKRALLELA TQNGRARVTS ERPSTALEKS IAEVWAHILN
VPDVGRNEDF FSIGGHSLAG MRIMSRLSKQ FGTRLSLNLL FEYPSVETLA GAIERSAEPL
TA