Gene Psyr_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1675 
Symbol 
ID3367180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1882468 
End bp1884507 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content63% 
IMG OID637652021 
ProductNADH:flavin oxidoreductase/NADH oxidase:FAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_234761 
Protein GI66044920 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.592508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG CTCATTATCC GCACCTGCTG GCCCCGCTGG ACCTGGGCTT CACGACCTTG 
CGCAACCGCA CCCTGATGGG CTCGATGCAC ACCGGTCTCG AAGAGCGGCC GGGCGGCTTC
GAGCGCATGG CGACCTATTT TGCCGAACGC GCCCGTGGCG GGGTCGGGCT GATGGTCACC
GGCGGCATCG CGCCCAACGA AGAGGGCGGG GTGTATGACG GCGCGGCAAA ACTCACCAAC
GCCAAAGAAG CGGAGCGCCA TCGTATCGTG ACCCAGGCGG TCCACGACGC TGGCGGCAAG
ATCTGCCTGC AGATCCTCCA TGCCGGTCGC TACGCCTACA GCCGCAAGCA GGTCGCGCCT
AGCGCCATTC AGGCGCCGAT CAACCCGTTT ACGCCGCGAG AGCTGGATGA AGAGGGCATC
GAAAAGCAGA TCGCTGATTT CGTGACCTGC TCGACACTGG CCCGCAGTGC CGGTTATGAC
GGTGTCGAAA TCATGGGCTC GGAAGGCTAC TTCATCAATC AGTTCCTGGC CGCGCATACC
AACCACCGGA CCGACCGTTG GGGCGGCAGC TATGAAAACC GCATGCGGCT GGCGGTCGAG
ATCGTCAGGC GCGTGCGTGA GGCGGTCGGG GCGCAGTTCA TCATCATCTT TCGCCTGTCG
ATGCTCGATC TTGTGGAAGG CGGCAGCAGT TGGGAAGAAA TCGTCGAGCT GGCCAAGGCG
GTCGAGCAGG CCGGTGCAAC CCTGATCAAC ACCGGCATCG GCTGGCATGA GGCGCGCATT
CCGACCATCG CCACCAAGGT GCCGCGCGCC GCGTTCAGCA AGGTCACTGC CAAACTGCGC
GGCTCGGTGA GCATCCCGCT GATTACCACC AACCGGATCA ATACCCCGGA AGTTGCCGAG
CGCATTCTCA GCGAAGGTGA TGCGGACATG GTCTCGATGG CTCGTCCGTT TCTGGCCGAT
CCCGAGTTCG TCAACAAGGC CGCTGCGGGC CATGCCGAAC GCATCAACAC CTGCATCGGC
TGCAACCAGG CCTGCCTCGA CCACACCTTC GGCGGCAAGC TGACCAGCTG TCTGGTCAAT
CCGCGTGCCT GCCACGAGAC CGAGCTCAAT TACCTGCCCA CCCTGCAGAT CAGGAAAATT
GCCGTAGTGG GTGCCGGGCC TGCCGGTCTG GCCGCGGCGA CCGTCGCCGC ACAGCGCGGG
CATGAGGTGA CGCTGTTCGA TTCGGCCAGC GAAATCGGCG GCCAGTTCAA TATCGCCAAG
CGCGTGCCGG GCAAGGAGGA GTTCGCCGAA ACGCTGCGTT ACTTCCGCAA CAAAGTGCAG
GAGACGGGTG TTCAGTTACG TCTTGGCAAT CGGGTAAAGG CTGCAGACCT GCTGGACGCA
GGCTTTGACG AGGTGATTCT GGCGACCGGC ATCGCGCCGC GCACACCGGC CATCCCCGGC
ATCGATAACC CCATGGTGTT GAGCTATCTG GACGTCATAT TGCAGCGCAA GCCGGTCGGA
CGCCGCGTGG CGGTGATAGG CGCGGGTGGT ATCGGTTTCG ATGTGTCGGA ATTTCTCGTG
CATCAGGGCG TGGCCACCAG TCTGGATCGC GAGGCTTTCT GGAAAGAGTG GGGCATCGAT
ATGACGTTGC AGGCTCGCGG CGGTGTCGCC GGGGTCAAAC CCGAAGTCCA CGCGCCGGCA
CGCCAGGTGT TTCTGTTGCA GCGCAAGAGC TCCAAGGTGG GCGACGGCCT GGGCAAGACC
ACCGGCTGGA TTCACCGCAC GGGGCTCAAG AACAAACAGG TGCAGATGCT CAATGCCGTT
CAGTACCTGA AAATCGACGA TGCAGGGCTG CATATTCGCA TCGGCGAAGA CGGCGAGGAA
AAGCTGCTGG CGGTGGATAA CGTAGTGATC TGTGCCGGGC AGGACCCGTT GCGTGAGCTG
TATGACGATC TGCTCAACGC CGGGCAAAGC GTGCACCTGA TTGGCGGCGC GGATGTTGCC
GCAGAGCTGG ACGCCAAGCG GGCCATCGAC CAGGGCTCAC GTCTGGCCGC CACTCTGTGA
 
Protein sequence
MTAAHYPHLL APLDLGFTTL RNRTLMGSMH TGLEERPGGF ERMATYFAER ARGGVGLMVT 
GGIAPNEEGG VYDGAAKLTN AKEAERHRIV TQAVHDAGGK ICLQILHAGR YAYSRKQVAP
SAIQAPINPF TPRELDEEGI EKQIADFVTC STLARSAGYD GVEIMGSEGY FINQFLAAHT
NHRTDRWGGS YENRMRLAVE IVRRVREAVG AQFIIIFRLS MLDLVEGGSS WEEIVELAKA
VEQAGATLIN TGIGWHEARI PTIATKVPRA AFSKVTAKLR GSVSIPLITT NRINTPEVAE
RILSEGDADM VSMARPFLAD PEFVNKAAAG HAERINTCIG CNQACLDHTF GGKLTSCLVN
PRACHETELN YLPTLQIRKI AVVGAGPAGL AAATVAAQRG HEVTLFDSAS EIGGQFNIAK
RVPGKEEFAE TLRYFRNKVQ ETGVQLRLGN RVKAADLLDA GFDEVILATG IAPRTPAIPG
IDNPMVLSYL DVILQRKPVG RRVAVIGAGG IGFDVSEFLV HQGVATSLDR EAFWKEWGID
MTLQARGGVA GVKPEVHAPA RQVFLLQRKS SKVGDGLGKT TGWIHRTGLK NKQVQMLNAV
QYLKIDDAGL HIRIGEDGEE KLLAVDNVVI CAGQDPLREL YDDLLNAGQS VHLIGGADVA
AELDAKRAID QGSRLAATL