Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1675 |
Symbol | |
ID | 3367180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1882468 |
End bp | 1884507 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652021 |
Product | NADH:flavin oxidoreductase/NADH oxidase:FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_234761 |
Protein GI | 66044920 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.592508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTG CTCATTATCC GCACCTGCTG GCCCCGCTGG ACCTGGGCTT CACGACCTTG CGCAACCGCA CCCTGATGGG CTCGATGCAC ACCGGTCTCG AAGAGCGGCC GGGCGGCTTC GAGCGCATGG CGACCTATTT TGCCGAACGC GCCCGTGGCG GGGTCGGGCT GATGGTCACC GGCGGCATCG CGCCCAACGA AGAGGGCGGG GTGTATGACG GCGCGGCAAA ACTCACCAAC GCCAAAGAAG CGGAGCGCCA TCGTATCGTG ACCCAGGCGG TCCACGACGC TGGCGGCAAG ATCTGCCTGC AGATCCTCCA TGCCGGTCGC TACGCCTACA GCCGCAAGCA GGTCGCGCCT AGCGCCATTC AGGCGCCGAT CAACCCGTTT ACGCCGCGAG AGCTGGATGA AGAGGGCATC GAAAAGCAGA TCGCTGATTT CGTGACCTGC TCGACACTGG CCCGCAGTGC CGGTTATGAC GGTGTCGAAA TCATGGGCTC GGAAGGCTAC TTCATCAATC AGTTCCTGGC CGCGCATACC AACCACCGGA CCGACCGTTG GGGCGGCAGC TATGAAAACC GCATGCGGCT GGCGGTCGAG ATCGTCAGGC GCGTGCGTGA GGCGGTCGGG GCGCAGTTCA TCATCATCTT TCGCCTGTCG ATGCTCGATC TTGTGGAAGG CGGCAGCAGT TGGGAAGAAA TCGTCGAGCT GGCCAAGGCG GTCGAGCAGG CCGGTGCAAC CCTGATCAAC ACCGGCATCG GCTGGCATGA GGCGCGCATT CCGACCATCG CCACCAAGGT GCCGCGCGCC GCGTTCAGCA AGGTCACTGC CAAACTGCGC GGCTCGGTGA GCATCCCGCT GATTACCACC AACCGGATCA ATACCCCGGA AGTTGCCGAG CGCATTCTCA GCGAAGGTGA TGCGGACATG GTCTCGATGG CTCGTCCGTT TCTGGCCGAT CCCGAGTTCG TCAACAAGGC CGCTGCGGGC CATGCCGAAC GCATCAACAC CTGCATCGGC TGCAACCAGG CCTGCCTCGA CCACACCTTC GGCGGCAAGC TGACCAGCTG TCTGGTCAAT CCGCGTGCCT GCCACGAGAC CGAGCTCAAT TACCTGCCCA CCCTGCAGAT CAGGAAAATT GCCGTAGTGG GTGCCGGGCC TGCCGGTCTG GCCGCGGCGA CCGTCGCCGC ACAGCGCGGG CATGAGGTGA CGCTGTTCGA TTCGGCCAGC GAAATCGGCG GCCAGTTCAA TATCGCCAAG CGCGTGCCGG GCAAGGAGGA GTTCGCCGAA ACGCTGCGTT ACTTCCGCAA CAAAGTGCAG GAGACGGGTG TTCAGTTACG TCTTGGCAAT CGGGTAAAGG CTGCAGACCT GCTGGACGCA GGCTTTGACG AGGTGATTCT GGCGACCGGC ATCGCGCCGC GCACACCGGC CATCCCCGGC ATCGATAACC CCATGGTGTT GAGCTATCTG GACGTCATAT TGCAGCGCAA GCCGGTCGGA CGCCGCGTGG CGGTGATAGG CGCGGGTGGT ATCGGTTTCG ATGTGTCGGA ATTTCTCGTG CATCAGGGCG TGGCCACCAG TCTGGATCGC GAGGCTTTCT GGAAAGAGTG GGGCATCGAT ATGACGTTGC AGGCTCGCGG CGGTGTCGCC GGGGTCAAAC CCGAAGTCCA CGCGCCGGCA CGCCAGGTGT TTCTGTTGCA GCGCAAGAGC TCCAAGGTGG GCGACGGCCT GGGCAAGACC ACCGGCTGGA TTCACCGCAC GGGGCTCAAG AACAAACAGG TGCAGATGCT CAATGCCGTT CAGTACCTGA AAATCGACGA TGCAGGGCTG CATATTCGCA TCGGCGAAGA CGGCGAGGAA AAGCTGCTGG CGGTGGATAA CGTAGTGATC TGTGCCGGGC AGGACCCGTT GCGTGAGCTG TATGACGATC TGCTCAACGC CGGGCAAAGC GTGCACCTGA TTGGCGGCGC GGATGTTGCC GCAGAGCTGG ACGCCAAGCG GGCCATCGAC CAGGGCTCAC GTCTGGCCGC CACTCTGTGA
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Protein sequence | MTAAHYPHLL APLDLGFTTL RNRTLMGSMH TGLEERPGGF ERMATYFAER ARGGVGLMVT GGIAPNEEGG VYDGAAKLTN AKEAERHRIV TQAVHDAGGK ICLQILHAGR YAYSRKQVAP SAIQAPINPF TPRELDEEGI EKQIADFVTC STLARSAGYD GVEIMGSEGY FINQFLAAHT NHRTDRWGGS YENRMRLAVE IVRRVREAVG AQFIIIFRLS MLDLVEGGSS WEEIVELAKA VEQAGATLIN TGIGWHEARI PTIATKVPRA AFSKVTAKLR GSVSIPLITT NRINTPEVAE RILSEGDADM VSMARPFLAD PEFVNKAAAG HAERINTCIG CNQACLDHTF GGKLTSCLVN PRACHETELN YLPTLQIRKI AVVGAGPAGL AAATVAAQRG HEVTLFDSAS EIGGQFNIAK RVPGKEEFAE TLRYFRNKVQ ETGVQLRLGN RVKAADLLDA GFDEVILATG IAPRTPAIPG IDNPMVLSYL DVILQRKPVG RRVAVIGAGG IGFDVSEFLV HQGVATSLDR EAFWKEWGID MTLQARGGVA GVKPEVHAPA RQVFLLQRKS SKVGDGLGKT TGWIHRTGLK NKQVQMLNAV QYLKIDDAGL HIRIGEDGEE KLLAVDNVVI CAGQDPLREL YDDLLNAGQS VHLIGGADVA AELDAKRAID QGSRLAATL
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