Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1672 |
Symbol | |
ID | 3367177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1877991 |
End bp | 1879526 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652018 |
Product | threonine dehydratase |
Protein accession | YP_234758 |
Protein GI | 66044917 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG ACCCGCACGC TCTGCTCAAC TATTACGCGC GCAAAATCCT CACCTCGCGC GTCTACGACG TTGCCATCGA AACGCCGCTG CAAGGCGCTC GCCAGCTGTC CGAACGGCTG GGCAATCAGG TGCTGCTCAA GCGCGAAGAC CTGCAGCCGG TGTTCTCGTT CAAGATTCGC GGTGCGTACA ACAAGCTCGC GCAACTGCCC GCAGAGCAGA CCGCACGGGG CGTGGTGACG GCCTCGGCAG GCAATCATGC CCAGGGCCTG GCGCTGGCAG CGCGTGAGCT GGGGATCAAG GCGACCATCG TCATGCCGCG CACCACTCCG GAGATCAAGG TCGAAGGCGT GCGCTCGCGG GGAGCCACCG TGGTGCTGCA TGGCGATTCG TTCCCGGAAG CGCTGGCCTA CTCGCTGAAG CTGGTCGACG AACAAGGTTT CGTCTACATC CATCCGTATG ACGACCCCGA CACCATCGCC GGGCAAGGCA CTGTGGCGAT GGAGATCCTT CGCCAGCAAC CGGGCCAGCT GGATGCGATC TTTGTTCCGG TCGGGGGTGG CGGTCTGATT GCTGGTATCG CGGCCTACGT GAAATACCTG CGCCCGGAGA TCAAGGTGAT CGGCGTCGAG CCGGACGATT CCAACTGCCT GCAGGCGGCG ATGGCCGCCG GGGAGCGCGT GGTGTTGAGC CAGGTCGGGC TGTTTGCCGA TGGCGTGGCG GTCGCGCAGA TCGGCCATCA CACCTTTGAA GTGTGCCGCC ATTATGTCGA TGAAGTGATC ACCGTCAGCA CGGATGAGAT CTGTGCGGCG ATCAAGGACA TCTACGATGA CACCCGCTCG ATCACCGAGC CCTCCGGCGC GTTGGGCGTG GCCGGGATCA AGAAGTATGT CGAGCAGCGC GGCGTCAGCG GCCAGACGCT GGTGGCGATT GATTCAGGGG CCAACGTCAA CTTCGATCGC TTGCGGCACG TGGCCGAGCG CGCCGAACTG GGCGAAGGCC GCGAGGCGAT CATTGCCGTG ACCATCCCCG AGCAACCGGG CAGCTTCAAG GCGTTCTGCG AGGCCATCGG CAAGCGGCAG ATCACCGAAT TCAACTACCG CTATCACACC GACCGCGAGG CGCACATCTT CGTCGGCGTG CAGACCCATC CCGAGAACGA CCCACGCAGC GCCCTGATCG CCAGCCTGAC CGGGCAAGGC TTCCCGGTGC TGGACCTGAC AGACAACGAA CTGGCCAAAC TGCACATCCG CCACATGGTC GGCGGGCATG CCGAGCGGGT CGACGATGAA GTGGTGCTGC GCTTCGAGTT CCCGGAGCGA CCGGGCGCGC TGTTCAACTT CCTCAACCGC CTGGGCGGGC GCTGGACCAT CTCCATGTTC CACTACCGCA ACCACGGCGC AGCCGATGGC CGAGTGGTTG CCGGGCTGGT GGTGCCGGAG GAAGAGCGGC ATCTGGTCGG TGCTGCGCTG GATGAGATTG GTTACCGGTA CTGGGATGAA AGCGAGAACC CGGCTTACCG GTTGTTTCTG GGCTGA
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Protein sequence | MSQDPHALLN YYARKILTSR VYDVAIETPL QGARQLSERL GNQVLLKRED LQPVFSFKIR GAYNKLAQLP AEQTARGVVT ASAGNHAQGL ALAARELGIK ATIVMPRTTP EIKVEGVRSR GATVVLHGDS FPEALAYSLK LVDEQGFVYI HPYDDPDTIA GQGTVAMEIL RQQPGQLDAI FVPVGGGGLI AGIAAYVKYL RPEIKVIGVE PDDSNCLQAA MAAGERVVLS QVGLFADGVA VAQIGHHTFE VCRHYVDEVI TVSTDEICAA IKDIYDDTRS ITEPSGALGV AGIKKYVEQR GVSGQTLVAI DSGANVNFDR LRHVAERAEL GEGREAIIAV TIPEQPGSFK AFCEAIGKRQ ITEFNYRYHT DREAHIFVGV QTHPENDPRS ALIASLTGQG FPVLDLTDNE LAKLHIRHMV GGHAERVDDE VVLRFEFPER PGALFNFLNR LGGRWTISMF HYRNHGAADG RVVAGLVVPE EERHLVGAAL DEIGYRYWDE SENPAYRLFL G
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