Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1652 |
Symbol | tmk |
ID | 3367154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1857020 |
End bp | 1857652 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637651995 |
Product | thymidylate kinase |
Protein accession | YP_234738 |
Protein GI | 66044897 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.401857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.314195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGGCT TGTTTATCAC TCTTGAAGGC CCGGAAGGTG CAGGCAAAAG TACCAACCGT GACTACCTGG CGGCGCAATT GCGTGCGCAG GGTGTTCAGG TACTGCTGAC CCGCGAGCCG GGTGGTACTC CGCTGGCCGA GCGTGTTCGC GAGCTGTTGC TGGCGCCCAG CGACGAGGCC ATGAGCGCTG ACACCGAGCT GCTGCTGGTG TTTGCGGCGC GTGCACAGCA TTTGGCCGAA GTCATTCGTC CAGCGCTGGC GCGTGGCGAG GTGGTGCTCT GTGATCGGTT TACCGATGCG ACCTACGCCT ATCAGGGCGG CGGCCGCGGC CTGTCCCATC AGCGTATTGC AGCGCTGGAA CAGTTCGTTC AAGGCGACCT GCGCCCTGAC CTGACGCTGG TCTTCGACCT GCCGGTGGAG ATCGGTCTGT CACGCGCCGC TGCACGCGGT CGGCTGGATC GCTTCGAGCA GGAAGGCAGA GCTTTCTTCG ACGCTGTGCG CAGCACCTAT CTGGAACGGG CCAGGGCCGA GCCTGCGCGC TATCGCCTGG TAGACGCCGC ACAGACTCTG GCCGACGTTC AGGCTTGCCT CGACACCTTG CTGCCTCAGT TGCTGGAGCT GCAACGTGGC TGA
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Protein sequence | MTGLFITLEG PEGAGKSTNR DYLAAQLRAQ GVQVLLTREP GGTPLAERVR ELLLAPSDEA MSADTELLLV FAARAQHLAE VIRPALARGE VVLCDRFTDA TYAYQGGGRG LSHQRIAALE QFVQGDLRPD LTLVFDLPVE IGLSRAAARG RLDRFEQEGR AFFDAVRSTY LERARAEPAR YRLVDAAQTL ADVQACLDTL LPQLLELQRG
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