Gene Psyr_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1651 
Symbol 
ID3367153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1855885 
End bp1857000 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content61% 
IMG OID637651994 
Producthypothetical protein 
Protein accessionYP_234737 
Protein GI66044896 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.245799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.342253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCTGG AAACAGCGGT TGTCCTGGCA GGTTTGCTGT TCGGCTTTGC GTTCTGGCAG 
CAGTACCAGG CGCTGAACCA ACCGCTCGAG GTGGCTCAGG AACAACTGCT GGACGTTCCG
GCCGGTTCGA CGCCGACCGG CGTACTCAAT CGATTGCAGG CCGATGGCGT AATCAAGGAC
GCTTTCTGGC TGCGTCTCTA CTGGCGTTTC AACCTGTCCG GACAGGCCCT GCACAGCGGT
GAATACCGCA TGGTGCCGGG GATGAACGTC AAAGGCCTGT TCGACGTCTG GAAGCGCAAG
GAAGTCGTGC AATACAGCCT GACGCTGGTC GAAGGCTGGA ATTTCCGCCA GGTGCGTGCT
GCGCTGGCCA AACAGGCCAA GCTCGATCAA ACGCTGGCAG GTCTGTCCGA CAGTGAGCTG
ATGGCGAAAA TAGGCCATCC CGATGTGTTC CCTGAAGGCC GTTTCTTTCC GGACACCTAT
CGCTACGTGC GCGGCATGAC CGATGCCGAA TTGCTCAAGC AGGCTTATAG CCGTCTGGAA
GAAGTACTCG ACGAGGAATG GAATGCGCGG TCGCCAGAGG CGCCCTATTC AAACCCTTAC
CAGGCGCTGA TCATGGCGTC GCTGGTCGAG AAGGAGACCG GCGTACCTCA GGAGCGCGGC
CAGATAGCCG GCGTGTTCGT GCGTCGCCTG AAGCTGGGCA TGCAGTTGCA GACCGACCCG
ACCGTGATCT ACGGCATGGG CGAGCGCTAC AACGGCAAGT TGACCCGCGC CAACCTCAAG
GAAGCCACGC CCTACAACAC CTACGTGATC GCCGGCCTGC CGCCGACGCC CATTTCGCTG
GTAGGGCGTG AAGCGATTCA TGCTGCTCTT AACCCGGTGG ACGGCAGCAG TCTGTATTTC
GTGGCCAAGG GCGATGGCAG CCACGTGTTC TCGGACGATC TGGATGCCCA TAACGCGGCC
GTGCGTGATT ATCAGCTCAA GCGCCGTGCG GATTATCGCT CCAGCCCGGC ACCTGCCGCA
CCTGCCACAC CGGCACCCGT AACTGACTTG CCCCCTTCGG AAAGCGTGCC TGCGGATACT
CCGGATGCGC CGCAGTCCGA GCCGAATGCA CAATGA
 
Protein sequence
MLLETAVVLA GLLFGFAFWQ QYQALNQPLE VAQEQLLDVP AGSTPTGVLN RLQADGVIKD 
AFWLRLYWRF NLSGQALHSG EYRMVPGMNV KGLFDVWKRK EVVQYSLTLV EGWNFRQVRA
ALAKQAKLDQ TLAGLSDSEL MAKIGHPDVF PEGRFFPDTY RYVRGMTDAE LLKQAYSRLE
EVLDEEWNAR SPEAPYSNPY QALIMASLVE KETGVPQERG QIAGVFVRRL KLGMQLQTDP
TVIYGMGERY NGKLTRANLK EATPYNTYVI AGLPPTPISL VGREAIHAAL NPVDGSSLYF
VAKGDGSHVF SDDLDAHNAA VRDYQLKRRA DYRSSPAPAA PATPAPVTDL PPSESVPADT
PDAPQSEPNA Q