Gene Psyr_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1643 
Symbol 
ID3367145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1849690 
End bp1850217 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content55% 
IMG OID637651986 
Producthypothetical protein 
Protein accessionYP_234729 
Protein GI66044888 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.17907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.271742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATG ACCCGATTCC ATCTCACGTT GACCCGCGCA AATTGTCCGA TCGCGGCACT 
ACCCTTCAGG GTGAAGTGCT GCTGGGCGAT CTGAAGAGAC TCTGCGACCC GCTTGCCGAC
ACTGTCGGTA CGGTGCAGGC GAAATTCGTT TTTGAGCGTG ACGAACGCCG TTCTGTGGTT
ATCCACAGTT CGATAGACGT CCCGGTCAAG ATGGTTTGCC AGCGTTGTCT TGAGCTGGTG
ACCCTGCCGA TCCACAGCGA ATGCAGTTAC GTTGTGGTGA AGGAGGGTGC GAATACCCAG
TCGTTACCGA AAGGTTATGA CGTGCTGGAA CTGGGCGAAG ATCCTTTGGA TCTGCTGGCA
TTGATCGAGG AGGAGCTATT GCTCGCCTTG CCCATTGTGC CTGCTCATCA TCCTGAAGAA
TGCCAGCAAC CGGCGGGTCT CGATGAGCCC GAACCGAGCG TGGACGAGGT AACGCGGTCC
AACCCGTTCA GTGTATTGGC GCAGTTAAAG CGTGACCCAA ACGTTTAG
 
Protein sequence
MLNDPIPSHV DPRKLSDRGT TLQGEVLLGD LKRLCDPLAD TVGTVQAKFV FERDERRSVV 
IHSSIDVPVK MVCQRCLELV TLPIHSECSY VVVKEGANTQ SLPKGYDVLE LGEDPLDLLA
LIEEELLLAL PIVPAHHPEE CQQPAGLDEP EPSVDEVTRS NPFSVLAQLK RDPNV