| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1639 |
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| Symbol | |
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| ID | 3367141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1846318 |
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| End bp | 1847274 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651982 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_234725 |
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| Protein GI | 66044884 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.289887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATA TTGCCCCTCC AACCCCCGGC GTCCAGCTGG TTGAGGTTGC CCCGGAACTT
GCCGGTCAAC GCATCGATAA CTTTCTGATC ACTTATCTCA AGGGTGTGCC CAAAACCTTG
ATTTACCGCA TTTTGCGCAA AGGCGAAGTG CGTGTGAACA AGGGGCGGAT CAAGCCGGAG
TACAAGTTGC AGGCAGGCGA TATCGTGCGC ATTCCTCCTG TGCGCGTGCC TGAGCGCGAC
GAGCCCGTGC CGGTTGCGCA GGCGCTGCTG CAGCGTCTCG AAGCGGCGAT CGTCTATGAA
GACAAGGCGC TTATCGTGCT CAACAAGCCT GCAGGTATTG CCGTGCATGG CGGCAGCGGC
CTGAGCTTTG GCGTGATCGA AGCGTTCCGC CAGTTGCGCC CGGATGCCAA GGAGCTCGAG
CTGGTGCACC GCCTTGATCG CGATACATCC GGTCTGCTGA TGATCGCCAA GAAACGCAGC
ATGCTGCGGC ATCTGCACGA AGCCCTGCGC GGCGACGGCG TCGACAAGCG CTACATGGCG
CTGGTCCGCG GTAACTGGGC AACGGCGCTG AAGCAGGTGC GTGCGCCATT GATGAAAAGC
AACCTGCGCT CCGGCGAGCG CATGGTCGAA GTGAATGAAG AGGGCAAGGA AGCCCTGACG
ATTTTCAAGG TGCTGCGTCG TTTCGGTGAC TTCGCCACCA TGGTCGAAGC CAAGCCGGTC
ACCGGGCGGA CTCACCAGAT CCGTGTGCAC ACCTTGCATG CGGGGCATGC CATAGCAGGT
GACACCAAGT ACGGTGACGA GAATTTCAGT CGCGAAATTC GCGATCTGGG CGGCAAGCGT
CTGTTTCTGC ATGCCTACAT GCTGACGGTG CCGATGCCCG ATGGCAGCAA ACTTAATGTG
CAGGCGCCTG TCGATGACAT GTGGGCCAAA ACAGTGGAGC GTCTGAGTGC GCCGTGA
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| Protein sequence | MTNIAPPTPG VQLVEVAPEL AGQRIDNFLI TYLKGVPKTL IYRILRKGEV RVNKGRIKPE
YKLQAGDIVR IPPVRVPERD EPVPVAQALL QRLEAAIVYE DKALIVLNKP AGIAVHGGSG
LSFGVIEAFR QLRPDAKELE LVHRLDRDTS GLLMIAKKRS MLRHLHEALR GDGVDKRYMA
LVRGNWATAL KQVRAPLMKS NLRSGERMVE VNEEGKEALT IFKVLRRFGD FATMVEAKPV
TGRTHQIRVH TLHAGHAIAG DTKYGDENFS REIRDLGGKR LFLHAYMLTV PMPDGSKLNV
QAPVDDMWAK TVERLSAP
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