| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1638 |
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| Symbol | |
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| ID | 3367140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1842286 |
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| End bp | 1845648 |
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| Gene Length | 3363 bp |
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| Protein Length | 1120 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651981 |
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| Product | ribonuclease E and G |
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| Protein accession | YP_234724 |
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| Protein GI | 66044883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.664118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGTGCCG AACGCCGTTT CCGGCAGCCC GGAAACCGAC GGTACTACAT GAAAAGAATG
CTGATTAACG CAACTCAACC CGAAGAGTTG CGTGTTGCAC TGGTAGACGG CCAGCGCCTC
TACGACCTGG ACATCGAGTC AGGTGCACGC GAGCAGAAGA AGGCCAACAT CTATAAAGGC
CGAATCACTC GCATCGAACC CAGCCTTGAG GCTGCCTTTG TCGATTTCGG CTCTGAGCGC
CACGGCTTTC TGCCCCTCAA GGAAATCTCC CGCGAGTACT TCAAGAAAGC CCCTGAAGGC
CGCGTCAACA TCAAGGACGT CCTGAGCGAA GGCCAGGAAG TCATCGTTCA GGTCGAGAAA
GAAGAACGTG GCAACAAGGG CGCAGCCCTG ACCACCTTCA TCAGCCTTGC CGGCCGCTAC
CTGGTTCTGA TGCCCAACAA CCCTCGTGCC GGCGGCATCT CGCGTCGTAT CGAAGGTGAA
GAGCGCAACG AACTGCGTGA AGCCCTCAAT GGCCTGATCG CGCCAGCCGA CATGGGTCTG
ATCGTTCGTA CTGCAGGCCT GGGCCGCAGC AGCGAAGAAA TGCAGTGGGA CCTCGATTAC
CTGCTGCAAC TGTGGACCGC CATCAAGGAA GCGTCCCTCG ATCGCTCCGC CCCTTTCCTT
ATCTACCAGG AAAGCAACGT CATCATCCGC GCTATCCGCG ACTACCTGCG TCAGGATATC
GGTGAAGTCC TGATCGACAG CATCGAAGCC CAGGAAGAAG CACTGACCTT CATCCGTCAG
GTGATGCCGC AGTACGCCAG CAAGATCAAG CTTTACGAAG ACAGCGTCCC GCTGTTCAAC
CGCTTCCAGA TCGAAAGCCA GATCGAAACC GCCTTCCAGC GCGTTGTCGA ACTGCCTTCC
GGCGGCTCCA TCGTCATCGA TCCGACCGAA GCCCTGGTGT CCATCGACAT CAACTCGGCG
CGCGCCACCA AAGGCAGCGA CATCGAAGAA ACTGCCCTGC AGACCAACCT TGAAGCGGCT
GAGGAAATCG CCCGTCAACT GCGTCTGCGT GACATCGGCG GCCTGATCGT CATCGACTTC
ATCGACATGA CGCCGGCCAA GAACCAGCGC GCCGTGGAAG AGAAAGTCCG CGAAAGCCTG
GAAGCCGACC GTGCCCGCGT GCAGATCGGT CGTATTTCGC GCTTCGGCCT GCTGGAAATG
TCCCGTCAGC GCCTGCGTCC ATCGCTGGGC GAAAGCAGCG GCATCGTCTG CCCTCGCTGC
AACGGCACCG GCATCATCCG TGATGTTGAA TCGCTGTCGC TGGCCATCCT GCGCCTGATC
GAAGAAGAAG CCCTGAAAGA CCGCACTGCC GAAGTGCGCG CTCAGGTGCC GATCCCGGTC
GCGGCCTTCC TGCTCAACGA AAAACGCAAC TCGATCACCA AGATCGAACT GCGCACCCGT
GCCCGCATCA TCATTCTGCC GAACGATCAG CTGGAAACGC CGCACTTCGA AGTTCAGCGT
CTGCGTGATG ACAGCCCTGA AGCGCACAGC AGCCAGACCA GCTACGAAAT TGCTGCTGCC
GCTGCCGAAG TGGAAGAAAT TGCACCATTG GCCGCTGCAA CCCGCACCCT GGTTCGTCAG
GAAGCAGCCG TCAAGACTGC CCCGGCTCGC GCCAATGCGC CGGTCCCGGT AGAAGCCGCG
GCCCCGGCAC CAACGCCTGC ACCCGCACCT GTCGCTCACG AGCCAAGCCT GTTCAAGGGT
CTGGTGAAAT CTCTGGTCAG CCTGTTCGCG ACCAAGGAAG AGCCTGTTGC TCCGGTCGTG
GTCGAGAAAC CTGTTGCAGA ACAGCGCCCA GCCCGCAACG AAGAACGCCG CAACGGCCGC
CAGCAGAGCC GTGGCCGCAA CAATCGCCGC GACGAAGAGC GCAAGCCTCG TGAAGAACGC
GCCCCCCGCG AAGAACGCGC AGAGCGCGCA CCTCGCGAAG AGCGTGCGCC GCGTGAGGAA
CGTGCACCTC GTGAAGAGCG CACCGTTCGC GAACCGCGTG AAGCCCGCGA GGAGTCGACA
CCGCGCGAAG AGCGTCCAGC CCGTACCACC CGCGAGCGCA AGCCGCGTGA AGCGCGTGAA
GATCGTCCGG TTCGCGAACT GCGCGAGCCT CTGGATGCAG CACCTGCGGT GAGCCTCGCT
CGTGAGGAGC GTCCTGAACG CGCCCCCCGT GAAGAGCGCC AGCCGCGCGC ACCTCGTGAA
GAACGTCAAC CACGCGCCGA ACAGGCTGCG GCTGCCGTGA GCGAAGAAGA GGAAGTGCTG
CTCAACGAAG AGCAGACCAA CAACGAGAAC CAGGAAGGCA ACGACGGCAG CGAAGGCGAC
CGCCCTCGCC GCCGCTCGCG TGGCCAGCGT CGTCGCAGCA ATCGTCGTGA GCGTCAGCGC
GATGCCAATG GCAACGTGAT CGAAGGCTCC GAAGAGAACG GCAACGAAGA AGAAGGCAGC
GCCACCGACC TGTCGGCGGG TCTGGGCTTC ACCGCCGCAG CTTCCGCTGC CAGCAGCGTG
ATCAGCGCGC CTGCCGAAGC CGACGCGCAT CAGCAGGCCG AACGTGCCAA CAGCAACGCA
GCCACTGCGG ACGCCGAGCC TGTGCATCAG GAAACTGCTG CCGAAGCGCC TGTGACTGAA
ACGTCAGTAG CTGAAACGCC AGCCACCGAA GCACCGGTTG CCGAAAAAGC ACAGACCGTT
GCCGAGCCGA CTGTCGAAGC ACCGGCCGTT GAAGCCCCTG TGGCAGACGA TGCTCCTGTA
GCGCAGCCTG CTCCAGAGGT TGAAGTTCAG CCGGCAGCGG TCGAAGCACC TGCGATTGCT
GCACAGTCCG AACTGTTCGA AGCACCTCAC GCAGAACGCG TAGTGCCGTT CAAGCCGACG
CCAGAGCCCG CACCACAGGC GCCGGTCGAA GCAGCGGCTC ATGAGGAAGT GCCAGCCACT
GAATCATCCG AACTGCCAAC GCCTGCACCT GCTGCTGTCG TCGAGCCGGT AGCGCTGCAA
GAAGAGCCTG CTCCTTACGT CGCGCCTCAG CCGGTCGTTG AAGAACAGGC ACCTGCCCCA
CAAGAGCAGG CACCTGCGGC TGAAGAAGCA GCGCCTGCAC CAGTGGTCAG CAGCACAGGC
CGCGCACCGA ACGATCCTCG TGAAGTTCGT CGCCGCAAGC GTGAAGAAGA AGCACGTCGT
CAACAGGAAG CCGCTGCTGC CAGCGCTCCA GTCGTCGAGG CGGCGCCTGC TGCCGCTGAA
GCAGAATCGG CCCAGCCTTC ACCGGCAGCC GAGGAAAAGA CCGAAGAAGC GGCAACTGAG
CAACCAGCAG TTAAACCGCA ACATGAAGCC GAGAAAGAAA ACGAGCCTAA ACCCCTCGTC
TAA
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| Protein sequence | MCAERRFRQP GNRRYYMKRM LINATQPEEL RVALVDGQRL YDLDIESGAR EQKKANIYKG
RITRIEPSLE AAFVDFGSER HGFLPLKEIS REYFKKAPEG RVNIKDVLSE GQEVIVQVEK
EERGNKGAAL TTFISLAGRY LVLMPNNPRA GGISRRIEGE ERNELREALN GLIAPADMGL
IVRTAGLGRS SEEMQWDLDY LLQLWTAIKE ASLDRSAPFL IYQESNVIIR AIRDYLRQDI
GEVLIDSIEA QEEALTFIRQ VMPQYASKIK LYEDSVPLFN RFQIESQIET AFQRVVELPS
GGSIVIDPTE ALVSIDINSA RATKGSDIEE TALQTNLEAA EEIARQLRLR DIGGLIVIDF
IDMTPAKNQR AVEEKVRESL EADRARVQIG RISRFGLLEM SRQRLRPSLG ESSGIVCPRC
NGTGIIRDVE SLSLAILRLI EEEALKDRTA EVRAQVPIPV AAFLLNEKRN SITKIELRTR
ARIIILPNDQ LETPHFEVQR LRDDSPEAHS SQTSYEIAAA AAEVEEIAPL AAATRTLVRQ
EAAVKTAPAR ANAPVPVEAA APAPTPAPAP VAHEPSLFKG LVKSLVSLFA TKEEPVAPVV
VEKPVAEQRP ARNEERRNGR QQSRGRNNRR DEERKPREER APREERAERA PREERAPREE
RAPREERTVR EPREAREEST PREERPARTT RERKPREARE DRPVRELREP LDAAPAVSLA
REERPERAPR EERQPRAPRE ERQPRAEQAA AAVSEEEEVL LNEEQTNNEN QEGNDGSEGD
RPRRRSRGQR RRSNRRERQR DANGNVIEGS EENGNEEEGS ATDLSAGLGF TAAASAASSV
ISAPAEADAH QQAERANSNA ATADAEPVHQ ETAAEAPVTE TSVAETPATE APVAEKAQTV
AEPTVEAPAV EAPVADDAPV AQPAPEVEVQ PAAVEAPAIA AQSELFEAPH AERVVPFKPT
PEPAPQAPVE AAAHEEVPAT ESSELPTPAP AAVVEPVALQ EEPAPYVAPQ PVVEEQAPAP
QEQAPAAEEA APAPVVSSTG RAPNDPREVR RRKREEEARR QQEAAAASAP VVEAAPAAAE
AESAQPSPAA EEKTEEAATE QPAVKPQHEA EKENEPKPLV
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