Gene Psyr_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1634 
Symbol 
ID3367136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1838687 
End bp1839118 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content59% 
IMG OID637651977 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_234720 
Protein GI66044879 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0335583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.448537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTTC GCCGTCGCAG ACCCCGGGAA AACATCGACA TCAATCTGGT CTCTCTGATT 
GATGTGGTGT TCATCCTGCT GCTGTTCTTC ATTGTGACGA CCACCTTTAC CCGTGAAACC
CAGTTGCGGG TGGATCTGCC CCAGGCCGTC ACAGGAACGC CGGACGTGGA CGCCAGCGCC
AAACAGCTGG ACATCGCCAT CAACGCCGAC GGGATTTTCT CGCTGAACAA TCAGTTGTTG
CCAAAAAACG ATTTGGCGAC GCTGATCGAA GCGCTGCAGC GCGAGTCGGG GGGCGATACC
AGCCTGCCGC TGTCGATCAG TGCCGATGGC AAGACCCCGC ACCAGTCGGT CATCACGGCC
ATGGATGCGG CGGGCAAGCT GGGCTTCAGT CACTTGCGCA TGACCACTGT CGAGGCCACA
CCGGCTAACT GA
 
Protein sequence
MKFRRRRPRE NIDINLVSLI DVVFILLLFF IVTTTFTRET QLRVDLPQAV TGTPDVDASA 
KQLDIAINAD GIFSLNNQLL PKNDLATLIE ALQRESGGDT SLPLSISADG KTPHQSVITA
MDAAGKLGFS HLRMTTVEAT PAN