Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1633 |
Symbol | |
ID | 3367135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1837974 |
End bp | 1838690 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651976 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_234719 |
Protein GI | 66044878 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0433342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.463741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTAGAGT GGCGCCAATT TTTCGAGGGA GTGATCACTG TGTGGGAACT GGTCAAATCT GGCGGCTGGA TGATGCTGCC GATTATTCTG AGCTCCATCG CCGCCGCCGG CATCATCATC GAGCGCTTGT GGACGTTGCG TGCCAGCCGT ATCACGCCAC CGCACCTGCT CGGGCAGGTC TGGCAGTGGA TTCAGGAACA GAAGCTGGAC AGCGAAAAGC TCAAGCAGCT GCGCGCTGAC TCGCCGCTGG GCGAAATCCT TGCCGCAGGG CTGGCCAATT CCAGGCATGG TCGCGAGATC ATGAAGGAAT GCATCGAAGA AGCCGCTGCC CGGGTCATTC ATGAACTGGA GCGCTACCTC AGCGCACTGG GCTCGATCGC TGCCATGGCG CCGTTGCTTG GTTTGCTCGG CACGGTGCTG GGCATGATCG ATATCTTCGG CTCGTTCAAC AGCTCCGGGG CCACCGCCAA TGCCGGTGTG CTGGCAGGTG GTATTTCCAA GGCGCTGATC TGTACCGCGT CGGGTCTTAT CGTAGCGATC CCGGCGATTT TCTTTCATCG CTTTCTGCAG AGCCGCGTCG ATGAGCTGGT AGTCGGCATG GAACAACAGG CCATTCGTCT GGTTGAAGTG GTGCAGGGCG ACCGCGATGT CGATCTGATC GACGCCAAGA TCGATCTCAA GTCGCTGGCC AGAGCGGGCG GGGGCAAGAA GAAGTGA
|
Protein sequence | MVEWRQFFEG VITVWELVKS GGWMMLPIIL SSIAAAGIII ERLWTLRASR ITPPHLLGQV WQWIQEQKLD SEKLKQLRAD SPLGEILAAG LANSRHGREI MKECIEEAAA RVIHELERYL SALGSIAAMA PLLGLLGTVL GMIDIFGSFN SSGATANAGV LAGGISKALI CTASGLIVAI PAIFFHRFLQ SRVDELVVGM EQQAIRLVEV VQGDRDVDLI DAKIDLKSLA RAGGGKKK
|
| |