Gene Psyr_1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1633 
Symbol 
ID3367135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1837974 
End bp1838690 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID637651976 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_234719 
Protein GI66044878 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0433342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.463741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAGT GGCGCCAATT TTTCGAGGGA GTGATCACTG TGTGGGAACT GGTCAAATCT 
GGCGGCTGGA TGATGCTGCC GATTATTCTG AGCTCCATCG CCGCCGCCGG CATCATCATC
GAGCGCTTGT GGACGTTGCG TGCCAGCCGT ATCACGCCAC CGCACCTGCT CGGGCAGGTC
TGGCAGTGGA TTCAGGAACA GAAGCTGGAC AGCGAAAAGC TCAAGCAGCT GCGCGCTGAC
TCGCCGCTGG GCGAAATCCT TGCCGCAGGG CTGGCCAATT CCAGGCATGG TCGCGAGATC
ATGAAGGAAT GCATCGAAGA AGCCGCTGCC CGGGTCATTC ATGAACTGGA GCGCTACCTC
AGCGCACTGG GCTCGATCGC TGCCATGGCG CCGTTGCTTG GTTTGCTCGG CACGGTGCTG
GGCATGATCG ATATCTTCGG CTCGTTCAAC AGCTCCGGGG CCACCGCCAA TGCCGGTGTG
CTGGCAGGTG GTATTTCCAA GGCGCTGATC TGTACCGCGT CGGGTCTTAT CGTAGCGATC
CCGGCGATTT TCTTTCATCG CTTTCTGCAG AGCCGCGTCG ATGAGCTGGT AGTCGGCATG
GAACAACAGG CCATTCGTCT GGTTGAAGTG GTGCAGGGCG ACCGCGATGT CGATCTGATC
GACGCCAAGA TCGATCTCAA GTCGCTGGCC AGAGCGGGCG GGGGCAAGAA GAAGTGA
 
Protein sequence
MVEWRQFFEG VITVWELVKS GGWMMLPIIL SSIAAAGIII ERLWTLRASR ITPPHLLGQV 
WQWIQEQKLD SEKLKQLRAD SPLGEILAAG LANSRHGREI MKECIEEAAA RVIHELERYL
SALGSIAAMA PLLGLLGTVL GMIDIFGSFN SSGATANAGV LAGGISKALI CTASGLIVAI
PAIFFHRFLQ SRVDELVVGM EQQAIRLVEV VQGDRDVDLI DAKIDLKSLA RAGGGKKK