Gene Psyr_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1626 
Symbol 
ID3367128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1828914 
End bp1829768 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content59% 
IMG OID637651969 
ProductPirin, N-terminal:Pirin, C-terminal 
Protein accessionYP_234712 
Protein GI66044871 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAT TTCGTAAAGT CCTGTCCATT CAAACGGGTC AGCCAGCGTC CGATGGCGCG 
GGCGTCAAAC TGACGCGCGT CTTCGGCGGG CGTGGTGTGG AGCAGTTCGA CCCGTTTCTG
ATGCTGGACG AGTTCGGATC GGACAAGCCG GATGACTACA TCGCCGGCTT TCCACCTCAC
CCGCACCGTG GCTTCGAAAC GGTGACCTAC ATGCTTGAGG GCCGTATGCG TCATGAAGAC
CATATGGGCA ATGTCGGCCT TCTGCAGGGC GGCGGTGTGC AGTGGATGAC CGCAGCACGC
GGGATCATTC ACAGCGAAAT GCCCGAACAG GAAGAAGGCA CCATGCGCGG CTTTCAGCTC
TGGCTGAACC TACCGGGCAA GAACAAGCTG AGCGACGCCA GCTATCAGGA CATCCAGCCG
GAAAACGTTC CGAGTATCAC CACTCAGGCC GGTGTGCAGG TGGTGGTATT GGCAGGGCAT
TTCGACGATG GTCAGGTTCA ACAGGCCGGG GCAGTACAGC GCCCGGATAC CGAGCCTCTG
TACTTTGACT TTGATATGCC TGCCGGCAGT CGTATCAGCC CGCACGTACC CGACGGGCAC
CTTGTGTTGC TGTACGTCTA TGAAGGCAGT GTCGAGCTGG AAGGCAGCGC CCAGCCGATC
GGCAAACGCC ATATGGCAAG GCTGTCCGAC AGCGGTGCCG TACAGATCAG CAGCACCGCG
GGTGCACGGC TGTTACTGAT TGCAGGCAAG CCCTTGCGTG AGCCGATCGT GCAATACGGC
CCTTTCGTGA TGAACACCAA GGAAGAGATC GAGCAGGCGA TTCGTGACTT CCGGGAAGAT
CGTCTGACGG CGTGA
 
Protein sequence
MTQFRKVLSI QTGQPASDGA GVKLTRVFGG RGVEQFDPFL MLDEFGSDKP DDYIAGFPPH 
PHRGFETVTY MLEGRMRHED HMGNVGLLQG GGVQWMTAAR GIIHSEMPEQ EEGTMRGFQL
WLNLPGKNKL SDASYQDIQP ENVPSITTQA GVQVVVLAGH FDDGQVQQAG AVQRPDTEPL
YFDFDMPAGS RISPHVPDGH LVLLYVYEGS VELEGSAQPI GKRHMARLSD SGAVQISSTA
GARLLLIAGK PLREPIVQYG PFVMNTKEEI EQAIRDFRED RLTA