Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1602 |
Symbol | |
ID | 3367104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1801574 |
End bp | 1802563 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651945 |
Product | ABC transporter |
Protein accession | YP_234688 |
Protein GI | 66044847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0412984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTTG TCAGCATTGA AAACCTGCAG AAAAGCTACG CCAGCACGTC AGTGTTCAGC GACATCAACT GCAGCATTGC GAAAGGCGAG TTCGTTACCT TGCTGGGCCC GTCGGGCTGC GGCAAATCCA CGTTGTTGCG TTGCATCGCC GGGCTGACCC CGGTCAACAG CGGGCGCATT CTGCTCGATG GCAGCGATCT GGTGCCGCTC ACCCCGCAAA AGCGCAACAT CGGCATGGTG TTCCAGAGTT ACGCGCTGTT TCCCAACATG ACCGTCGAGC AAAACGTCGC CTTCGGGCTG CGCATTCAGA AAGTCAGTGC TGACGAGAGT ACACGGCGCG TCGCCGAGAT TCTGCGCATG GTCGAGCTGC ACGATTTTGC CACGCGTTAC CCGCATCAGT TGTCCGGCGG GCAATGCCAG CGCGTGGCGC TGGCGCGTTC GCTGGTCACT CGCCCGCGTC TGCTGTTGCT CGATGAGCCG CTGTCGGCGC TGGATGCGCG GATTCGCAAG AACCTGCGCG AACAGATCCG TGCCATTCAG CGCGAGCTGG GCCTGACCAC CATTTTCGTG ACCCACGACC AGGAAGAAGC ACTGACCATG TCAGACCGTA TCTTCCTGAT GAACCAGGGC CGGATCGTGC AGAGCGGCGA CGCCGAAACC CTCTACACCG CGCCTGTGGA CGTATTCGCC GCAGGCTTCA TCGGCAACTA CAACCTGCTG GAAGCCGACG ACGCCACGCG CCTGATGCAG CGCCCGATCA ACAGCCGTGT GGCGATCCGC CCTGAATCGA TCCAATTGAG CCTGACCGGC GAACTGGAAG GCGAAATACG CAGTCACAGT CTGCTCGGCA ACGTCATCCG TTACCGGGTA CAGGCCCGTG GCGTGAAGCT GGTGGTCGAC GTACTGAACC GCAGCGCCGA CGACCTGCAC CCGGACGGAA GGCGTGTAAC ACTGAACATC GAACCGTCGG CGCTGTGCGC GCTTGACTGA
|
Protein sequence | MSFVSIENLQ KSYASTSVFS DINCSIAKGE FVTLLGPSGC GKSTLLRCIA GLTPVNSGRI LLDGSDLVPL TPQKRNIGMV FQSYALFPNM TVEQNVAFGL RIQKVSADES TRRVAEILRM VELHDFATRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK NLREQIRAIQ RELGLTTIFV THDQEEALTM SDRIFLMNQG RIVQSGDAET LYTAPVDVFA AGFIGNYNLL EADDATRLMQ RPINSRVAIR PESIQLSLTG ELEGEIRSHS LLGNVIRYRV QARGVKLVVD VLNRSADDLH PDGRRVTLNI EPSALCALD
|
| |