Gene Psyr_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1602 
Symbol 
ID3367104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1801574 
End bp1802563 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID637651945 
ProductABC transporter 
Protein accessionYP_234688 
Protein GI66044847 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0412984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG TCAGCATTGA AAACCTGCAG AAAAGCTACG CCAGCACGTC AGTGTTCAGC 
GACATCAACT GCAGCATTGC GAAAGGCGAG TTCGTTACCT TGCTGGGCCC GTCGGGCTGC
GGCAAATCCA CGTTGTTGCG TTGCATCGCC GGGCTGACCC CGGTCAACAG CGGGCGCATT
CTGCTCGATG GCAGCGATCT GGTGCCGCTC ACCCCGCAAA AGCGCAACAT CGGCATGGTG
TTCCAGAGTT ACGCGCTGTT TCCCAACATG ACCGTCGAGC AAAACGTCGC CTTCGGGCTG
CGCATTCAGA AAGTCAGTGC TGACGAGAGT ACACGGCGCG TCGCCGAGAT TCTGCGCATG
GTCGAGCTGC ACGATTTTGC CACGCGTTAC CCGCATCAGT TGTCCGGCGG GCAATGCCAG
CGCGTGGCGC TGGCGCGTTC GCTGGTCACT CGCCCGCGTC TGCTGTTGCT CGATGAGCCG
CTGTCGGCGC TGGATGCGCG GATTCGCAAG AACCTGCGCG AACAGATCCG TGCCATTCAG
CGCGAGCTGG GCCTGACCAC CATTTTCGTG ACCCACGACC AGGAAGAAGC ACTGACCATG
TCAGACCGTA TCTTCCTGAT GAACCAGGGC CGGATCGTGC AGAGCGGCGA CGCCGAAACC
CTCTACACCG CGCCTGTGGA CGTATTCGCC GCAGGCTTCA TCGGCAACTA CAACCTGCTG
GAAGCCGACG ACGCCACGCG CCTGATGCAG CGCCCGATCA ACAGCCGTGT GGCGATCCGC
CCTGAATCGA TCCAATTGAG CCTGACCGGC GAACTGGAAG GCGAAATACG CAGTCACAGT
CTGCTCGGCA ACGTCATCCG TTACCGGGTA CAGGCCCGTG GCGTGAAGCT GGTGGTCGAC
GTACTGAACC GCAGCGCCGA CGACCTGCAC CCGGACGGAA GGCGTGTAAC ACTGAACATC
GAACCGTCGG CGCTGTGCGC GCTTGACTGA
 
Protein sequence
MSFVSIENLQ KSYASTSVFS DINCSIAKGE FVTLLGPSGC GKSTLLRCIA GLTPVNSGRI 
LLDGSDLVPL TPQKRNIGMV FQSYALFPNM TVEQNVAFGL RIQKVSADES TRRVAEILRM
VELHDFATRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK NLREQIRAIQ
RELGLTTIFV THDQEEALTM SDRIFLMNQG RIVQSGDAET LYTAPVDVFA AGFIGNYNLL
EADDATRLMQ RPINSRVAIR PESIQLSLTG ELEGEIRSHS LLGNVIRYRV QARGVKLVVD
VLNRSADDLH PDGRRVTLNI EPSALCALD