| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1587 |
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| Symbol | |
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| ID | 3367087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1786080 |
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| End bp | 1787027 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637651928 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_234673 |
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| Protein GI | 66044832 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.196168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGT TGGCAGCCTT GAGTCGTTTT GTCGGCAACA CGTTTGCCTA CTGGGTTTTG
CTGTTCGCCA TTCTGGCATT TCTGTTTCCG CAGGCATTCA TTGGCCTTAA GAGCTGGATC
GTGCCGCTGC TGGGGCTGGT CATGTTCGGC ATGGGCCTGA CCCTGAAACT CGAAGACTTC
TCTGAAGTGG CGCGTAACCC GTGGCGAGTG GCGCTGGGTG TGATCGCGCA CTTTGTGATC
ATGCCCGGTG TGGCCTGGTT GCTGTGCCAG GTGTTTCAAC TGCCGCCGGA GATCGCCGTG
GGTGTGATTC TGGTCGGCTG CTGTCCGAGC GGCACTTCAT CCAACGTCAT GGCCTGGCTG
GCAAAGGGTG ATCTGGCGCT GGCGGTAGCA ATCGCTGCGG TCACTACCCT GCTCGCCCCG
CTGCTGACCC CGACCTTGAT CTGGTTCCTG GCGTCGGCGT GGCTGCCGGT GTCCTTTCTG
GATATGTTCT GGTCGATCCT GCAACTGGTC ATGCTGCCGA TTGTGTTGGG CGTGATTGCC
CAGCGTCTGT TGGGCGCGCG GGTCAGCTAT GCGGTCGATG TGCTGCCGCT GGTGTCGGTG
GTCAGTATTG TGATGATCGT CTGCGCGGTG GTCGCCGCCA GTCAGGCGAA AATCGCTGAA
TCCGGCCTGC TGATCATGGC GGTGGTGATT CTGCATAACA CGTTCGGTTT TCTGCTGGGT
TATTTCACTG GCAAGGTTTT CAAGCTGCCA TTGGCGCAAC GCAAGTCGCT GGCGCTGGAG
GTCGGTATGC AGAACTCGGG GCTGGGCGCT GCGCTGGCCA GTGCACATTT TTCGCCGCTG
GCGGCGGTGC CAAGTGCGCT GTTCAGTGTC TGGCACAATA TTTCCGGGGC GTTGCTGTCG
ACGTATTTCA GGAAGATGCC GGAGGAAGAG AATACGTCCG TCCGTTGA
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| Protein sequence | MRALAALSRF VGNTFAYWVL LFAILAFLFP QAFIGLKSWI VPLLGLVMFG MGLTLKLEDF
SEVARNPWRV ALGVIAHFVI MPGVAWLLCQ VFQLPPEIAV GVILVGCCPS GTSSNVMAWL
AKGDLALAVA IAAVTTLLAP LLTPTLIWFL ASAWLPVSFL DMFWSILQLV MLPIVLGVIA
QRLLGARVSY AVDVLPLVSV VSIVMIVCAV VAASQAKIAE SGLLIMAVVI LHNTFGFLLG
YFTGKVFKLP LAQRKSLALE VGMQNSGLGA ALASAHFSPL AAVPSALFSV WHNISGALLS
TYFRKMPEEE NTSVR
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