Gene Psyr_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1579 
Symbol 
ID3367079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1773656 
End bp1774834 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content56% 
IMG OID637651920 
Producthypothetical protein 
Protein accessionYP_234665 
Protein GI66044824 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.286073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCA ACCTGTTCAA CGAAATGCGC GCGGCCAAAG TGCCGGTGTC TCTGCGTGAA 
CTGCTGGACC TGATCAATGC GCTGAAACAG CGGGTCGTGT TCGCCGACAT CGATGAGTTC
TACTTCTTGG CGCGCACGAT TCTGGTCAAG GACGAGCGCC ATTTCGACAA GTTCGACCGC
GCCTTCGGTG CGTATTTCAA CGGCCTGGAA AACCTCGACG AGCATTTGCA GGCGCTGATC
CCGGAAGACT GGCTGCGCAA AGAGTTCGAG CGCTCGCTGA CGGACGAGGA ACGCGCGCAG
ATCCAGTCGC TGGGCGGCCT CGACAAACTG ATCGAGGAGT TCAAGAAACG TCTGGAAGAA
CAGAAGGAAC GCCATGCCGG TGGCAACAAA TGGATCGGCA CCGGTGGCAC CAGCCCGTTC
GGTTCGGGTG GTTACAACCC GGAAGGCATT CGTGTCGGCG ATGCAGGCGA GCGCAAAGGC
AAGGCCGTCA AAGTCTGGGA CCAGCGAGAA TATAAAAACC TGGACGATCA GGTTGAACTG
GGGACGCGCA ATATCAAGGT GGCCCTGCGT CGCCTGCGCA AGTTCGCTCG TCAGGGTGCT
GCGGATGAAC TGGACATCGA CAGCACTATC GATCACACCG CACGCGATGC CGGCCTGCTG
AACATTCAGA TGCGTCCGGA GCGGCGCAAC ACCATCAAGT TATTACTGCT GTTCGACATC
GGCGGCTCGA TGGATTCGCA CGTCAAGGTC TGTGAAGAAC TGTTCTCCGC ATGCAAGACC
GAATTCAAGC ATATGGAGTA TTTCTACTTC CATAACTTCA TCTATGAATC GGTGTGGAAG
AACAACCTGC GCAGAAGCTC TGAGCGGACC GCTACCCAGG ACCTGCTGCA CAAGTATGGC
GAGGACTACA AAGTGATTTT CATCGGCGAC GCCTCGATGG CGCCCTATGA AATCACCCAG
CCCGGCGGCA GCGTCGAACA CTGGAATGAA GAGGCGGGCT ATGTATGGAT GCAGCGCTTC
ATGGCCAAAT TCAAGAAGAT CATCTGGATC AATCCCTACC CGAAAGATGC CTGGGACTAC
ACCACCTCGA CGCATATCGT GCGTGATTTG ATTGAAGGTC AGATGTATCC GCTGACCCTC
AGCGGTCTGG AAGAAGGCAT GCGCTACCTG GCGAAATGA
 
Protein sequence
MLLNLFNEMR AAKVPVSLRE LLDLINALKQ RVVFADIDEF YFLARTILVK DERHFDKFDR 
AFGAYFNGLE NLDEHLQALI PEDWLRKEFE RSLTDEERAQ IQSLGGLDKL IEEFKKRLEE
QKERHAGGNK WIGTGGTSPF GSGGYNPEGI RVGDAGERKG KAVKVWDQRE YKNLDDQVEL
GTRNIKVALR RLRKFARQGA ADELDIDSTI DHTARDAGLL NIQMRPERRN TIKLLLLFDI
GGSMDSHVKV CEELFSACKT EFKHMEYFYF HNFIYESVWK NNLRRSSERT ATQDLLHKYG
EDYKVIFIGD ASMAPYEITQ PGGSVEHWNE EAGYVWMQRF MAKFKKIIWI NPYPKDAWDY
TTSTHIVRDL IEGQMYPLTL SGLEEGMRYL AK