Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1576 |
Symbol | |
ID | 3367076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1771329 |
End bp | 1772129 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651917 |
Product | glutamine amidotransferase, class-II |
Protein accession | YP_234662 |
Protein GI | 66044821 |
COG category | [R] General function prediction only |
COG ID | [COG0121] Predicted glutamine amidotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00922553 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTGTGAAC TACTGGGCAT GAGCGCCAAC GTCCCGACCG ACATTGTCTT CAGCTTTACC GGGCTGATGC AGCGTGGCGG CCGCACCGGT CCGCATCGCG ATGGCTGGGG CATTGCCTTC TACGAGGGCC GTGGCCTGCG TCTGTTTCAG GACCCGGCAG CCAGCAGCGA ATCGGAAGTC GCACAGTTGG TGCAGCGTTA TCCCATCAAG AGCGAAGTCG TGATTGGCCA TATTCGGCAG GCCAACGTCG GCAAGGTCTG CCTGTCCAAT ACCCATCCTT TCGTCCGTGA GCTCTGGGGC CGTAACTGGT GCTTTGCGCA TAACGGTCAG CTGGCGGATT TCACCCCGGG CGTTACTTTT TATCGGCCAG TGGGCGATAC CGACAGCGAA GCGGCATTCT GCGACTTGCT CAATCGCGTC CGCGAAACCT TTCCCGAGCC CGTCGACGTC GAGGCGTTGC TGCCTACGCT GATTCAGGCG TGTGCCGAAT ATCGCAGTAA AGGCGTGTTC AACTGCCTGT TGAGCGACGG CGACTGGCTG TTTTGCTTTT GCAGTACCAA ACTGGTTCAG ATCACTCGCC GTGCTCCGTT CGGTCCGGCG AGGTTGAAAG ATGTCGACGT GATTGTCGAT TTTCAGGCTG AAACCACACC GCACGACGTG GTCACGGTCA TCGCGACCGA ACCCTTGACC GAGAACGAAA ACTGGAACCG CTATGAGCCG GGCCAGTGGA GCCTGTGGCG CAAGGGCGAG TGCGTGGTGC AAGGCTCGGT CGACACCGTC ACCGAGACTG CCAGGCCGTA A
|
Protein sequence | MCELLGMSAN VPTDIVFSFT GLMQRGGRTG PHRDGWGIAF YEGRGLRLFQ DPAASSESEV AQLVQRYPIK SEVVIGHIRQ ANVGKVCLSN THPFVRELWG RNWCFAHNGQ LADFTPGVTF YRPVGDTDSE AAFCDLLNRV RETFPEPVDV EALLPTLIQA CAEYRSKGVF NCLLSDGDWL FCFCSTKLVQ ITRRAPFGPA RLKDVDVIVD FQAETTPHDV VTVIATEPLT ENENWNRYEP GQWSLWRKGE CVVQGSVDTV TETARP
|
| |