Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1571 |
Symbol | |
ID | 3367071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1765724 |
End bp | 1767502 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651912 |
Product | twin-arginine translocation pathway signal:copper-resistance protein CopA |
Protein accession | YP_234657 |
Protein GI | 66044816 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2132] Putative multicopper oxidases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.402228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.015663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCC GAACCTCAAG ACGAACCTTT GTGAAAGGGC TGGCCGCCAG TGGCCTGCTC GGCGGCCTCG GGCTATGGCG CAGCCCGGCG TGGGCGGTGG CCAACCCGGG TCAGCCCAAC GGGTTGTCCG GCACCGAGTT CGATCTGTAT ATCGGCGAAA CCCAGGTCAA CATCACCGGC AATGCCAAGA CCGCGCAGAC CATCAACGGC GGCATTCCCG GCCCGCTGCT GCGCTGGCGC GAAGGCGATA CCGTGACCCT GAGGGTCAAG AACCGGCTCG ACGAAGCCAC ATCCATCCAT TGGCACGGCA TCATCCTGCC GGCCAACATG GACGGCGTGC CGGGGTTGAG CTTTGACGGC ATCGCGCCGG ACGGCATGTA TGTCTACCGC TTCAAGGTCA GGCAGCATGG CACCTACTGG TATCACAGCC ACTCCGGCTT CCAGGAACAG TCGGGGGTCT ACGGGCCACT GGTGATCGAC CCGAAAGAGC CGGAGCCGTT CGAATACGAC CGCGAACACG TGATCATGCT CAGCGACTGG ACCGACGAAG AGCCGGTCCA GCTGATGAAA ACGCTCAAGA AACAGTCCGA TTACTACAAC AATAATCAGC GCACCGTCGG CGACTTCATC AACGACGTGG GTGAAAAAGG CTGGAGCGAG ACCACCCGTG ATCGCTGGAT GTGGGCGCAG ATGAGGATGG ACCCGACCGA TCTCGCGGAT GTCAGCGGCG CGACCTACAC CTACCTGATG AACGGTCAGG CGCCGAACAT GAACTGGACC GGGCTGTTCA AGCCTGGCGA GCGGATCCGA CTGCGGCTGA TCAACGGCTC GGCAATGACG TACTTCGACG TGCGTATTCC GGGCCTGAAG ATGACCGTAG TGGCCAGCGA CGGCCTGCAC GTCAAGCCGG TGACCGTCGA CGAGTTGCGC ATCGCAGTGG CGGAAACCTT CGACGTGATT GTCGAACCGG CGGAAGGTGC CTATACGCTG TTCGCCCAGT CGATGGACCG CACCGGTTAT GCCCGCGGCA CCCTGGCCAG CAGGCCCGGC CTGCAGGCTG CCGTTCCGCC CCTCGATCCA CGCCCGCTGT CGAGCATGGA TGATATGGGC ATGGCGGGCA TGGAGCATGG CAGCATGAAC CACGCCGCAG CCCCGGCAAC GCACGACATG TCAGGCATGG ACCACAGCAA GATGGGCCAC GACGCGATGC CCGGAATGGA CCACGCGCAG ACGCCGGCCC AGAAAACGCC GACTCCGCAA TCGCACCCCG AGAGCGAAAA CAACAACCCG CTGGTCGACA TGCAAGCCAT GAGCACCTCG CCCAAGCTCG ACGATCCGGG CATCGGCCTC AGGGGCAATG GCCGCAGAGT CCTGACCTAC GCTGACCTGC GCAGCACCTT CGAAGACCCG GACGGCCGTG AGCCCAGTCG CACGATCGAG CTGCACCTGA CCGGGCATAT GGAAAAATAC GCCTGGTCAT TCGACGGTGT GAAGTTCTCG GACGCCAAAC CGCTGATGCT CAAATACGGT GAGCGGGTGC GTGTCGTGCT GGTCAACGAC ACGATGATGA CCCACCCCAT CCATCTGCAT GGCATGTGGA GCGACCTCGA AGACGAGAAT GGACAGTTCA TGGTGCGCAA ACACACCATC GACATGCCAC CGGGATCACG CCGCAGCTAT CGCGTGACCG CCGATGCGCT GGGCCGTTGG GCTTATCACT GTCACATGCT GTACCACATG GAAATGGGCA TGTTCCGCGA AGTGCGGGTG GAAGAATGA
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Protein sequence | MPTRTSRRTF VKGLAASGLL GGLGLWRSPA WAVANPGQPN GLSGTEFDLY IGETQVNITG NAKTAQTING GIPGPLLRWR EGDTVTLRVK NRLDEATSIH WHGIILPANM DGVPGLSFDG IAPDGMYVYR FKVRQHGTYW YHSHSGFQEQ SGVYGPLVID PKEPEPFEYD REHVIMLSDW TDEEPVQLMK TLKKQSDYYN NNQRTVGDFI NDVGEKGWSE TTRDRWMWAQ MRMDPTDLAD VSGATYTYLM NGQAPNMNWT GLFKPGERIR LRLINGSAMT YFDVRIPGLK MTVVASDGLH VKPVTVDELR IAVAETFDVI VEPAEGAYTL FAQSMDRTGY ARGTLASRPG LQAAVPPLDP RPLSSMDDMG MAGMEHGSMN HAAAPATHDM SGMDHSKMGH DAMPGMDHAQ TPAQKTPTPQ SHPESENNNP LVDMQAMSTS PKLDDPGIGL RGNGRRVLTY ADLRSTFEDP DGREPSRTIE LHLTGHMEKY AWSFDGVKFS DAKPLMLKYG ERVRVVLVND TMMTHPIHLH GMWSDLEDEN GQFMVRKHTI DMPPGSRRSY RVTADALGRW AYHCHMLYHM EMGMFREVRV EE
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