Gene Psyr_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1571 
Symbol 
ID3367071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1765724 
End bp1767502 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content62% 
IMG OID637651912 
Producttwin-arginine translocation pathway signal:copper-resistance protein CopA 
Protein accessionYP_234657 
Protein GI66044816 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.402228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.015663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC GAACCTCAAG ACGAACCTTT GTGAAAGGGC TGGCCGCCAG TGGCCTGCTC 
GGCGGCCTCG GGCTATGGCG CAGCCCGGCG TGGGCGGTGG CCAACCCGGG TCAGCCCAAC
GGGTTGTCCG GCACCGAGTT CGATCTGTAT ATCGGCGAAA CCCAGGTCAA CATCACCGGC
AATGCCAAGA CCGCGCAGAC CATCAACGGC GGCATTCCCG GCCCGCTGCT GCGCTGGCGC
GAAGGCGATA CCGTGACCCT GAGGGTCAAG AACCGGCTCG ACGAAGCCAC ATCCATCCAT
TGGCACGGCA TCATCCTGCC GGCCAACATG GACGGCGTGC CGGGGTTGAG CTTTGACGGC
ATCGCGCCGG ACGGCATGTA TGTCTACCGC TTCAAGGTCA GGCAGCATGG CACCTACTGG
TATCACAGCC ACTCCGGCTT CCAGGAACAG TCGGGGGTCT ACGGGCCACT GGTGATCGAC
CCGAAAGAGC CGGAGCCGTT CGAATACGAC CGCGAACACG TGATCATGCT CAGCGACTGG
ACCGACGAAG AGCCGGTCCA GCTGATGAAA ACGCTCAAGA AACAGTCCGA TTACTACAAC
AATAATCAGC GCACCGTCGG CGACTTCATC AACGACGTGG GTGAAAAAGG CTGGAGCGAG
ACCACCCGTG ATCGCTGGAT GTGGGCGCAG ATGAGGATGG ACCCGACCGA TCTCGCGGAT
GTCAGCGGCG CGACCTACAC CTACCTGATG AACGGTCAGG CGCCGAACAT GAACTGGACC
GGGCTGTTCA AGCCTGGCGA GCGGATCCGA CTGCGGCTGA TCAACGGCTC GGCAATGACG
TACTTCGACG TGCGTATTCC GGGCCTGAAG ATGACCGTAG TGGCCAGCGA CGGCCTGCAC
GTCAAGCCGG TGACCGTCGA CGAGTTGCGC ATCGCAGTGG CGGAAACCTT CGACGTGATT
GTCGAACCGG CGGAAGGTGC CTATACGCTG TTCGCCCAGT CGATGGACCG CACCGGTTAT
GCCCGCGGCA CCCTGGCCAG CAGGCCCGGC CTGCAGGCTG CCGTTCCGCC CCTCGATCCA
CGCCCGCTGT CGAGCATGGA TGATATGGGC ATGGCGGGCA TGGAGCATGG CAGCATGAAC
CACGCCGCAG CCCCGGCAAC GCACGACATG TCAGGCATGG ACCACAGCAA GATGGGCCAC
GACGCGATGC CCGGAATGGA CCACGCGCAG ACGCCGGCCC AGAAAACGCC GACTCCGCAA
TCGCACCCCG AGAGCGAAAA CAACAACCCG CTGGTCGACA TGCAAGCCAT GAGCACCTCG
CCCAAGCTCG ACGATCCGGG CATCGGCCTC AGGGGCAATG GCCGCAGAGT CCTGACCTAC
GCTGACCTGC GCAGCACCTT CGAAGACCCG GACGGCCGTG AGCCCAGTCG CACGATCGAG
CTGCACCTGA CCGGGCATAT GGAAAAATAC GCCTGGTCAT TCGACGGTGT GAAGTTCTCG
GACGCCAAAC CGCTGATGCT CAAATACGGT GAGCGGGTGC GTGTCGTGCT GGTCAACGAC
ACGATGATGA CCCACCCCAT CCATCTGCAT GGCATGTGGA GCGACCTCGA AGACGAGAAT
GGACAGTTCA TGGTGCGCAA ACACACCATC GACATGCCAC CGGGATCACG CCGCAGCTAT
CGCGTGACCG CCGATGCGCT GGGCCGTTGG GCTTATCACT GTCACATGCT GTACCACATG
GAAATGGGCA TGTTCCGCGA AGTGCGGGTG GAAGAATGA
 
Protein sequence
MPTRTSRRTF VKGLAASGLL GGLGLWRSPA WAVANPGQPN GLSGTEFDLY IGETQVNITG 
NAKTAQTING GIPGPLLRWR EGDTVTLRVK NRLDEATSIH WHGIILPANM DGVPGLSFDG
IAPDGMYVYR FKVRQHGTYW YHSHSGFQEQ SGVYGPLVID PKEPEPFEYD REHVIMLSDW
TDEEPVQLMK TLKKQSDYYN NNQRTVGDFI NDVGEKGWSE TTRDRWMWAQ MRMDPTDLAD
VSGATYTYLM NGQAPNMNWT GLFKPGERIR LRLINGSAMT YFDVRIPGLK MTVVASDGLH
VKPVTVDELR IAVAETFDVI VEPAEGAYTL FAQSMDRTGY ARGTLASRPG LQAAVPPLDP
RPLSSMDDMG MAGMEHGSMN HAAAPATHDM SGMDHSKMGH DAMPGMDHAQ TPAQKTPTPQ
SHPESENNNP LVDMQAMSTS PKLDDPGIGL RGNGRRVLTY ADLRSTFEDP DGREPSRTIE
LHLTGHMEKY AWSFDGVKFS DAKPLMLKYG ERVRVVLVND TMMTHPIHLH GMWSDLEDEN
GQFMVRKHTI DMPPGSRRSY RVTADALGRW AYHCHMLYHM EMGMFREVRV EE