Gene Psyr_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1566 
Symbol 
ID3367066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1762508 
End bp1763101 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID637651907 
Productnitroreductase 
Protein accessionYP_234652 
Protein GI66044811 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00494476 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGA ACCCTCGCAT CGCCGATCAC CCGATCGACC CGCAATTCAC CGAACGCTGG 
TCGCCACGTG CCTTCAACGG CCAAAGCATC GACCAGGAAA CCTTGCTGAG CTTTTTCGAA
GCCGCACGCT GGGCGCCATC GGCGTATAAC TCGCAGCCTT GGCGCTTTCT CTATGCACGT
CGCGATACGC CGAACTGGGA GCGTTACCTG GGCTTGCTGA ACGAGTTCAA TCGCAGTTGG
GCGCAACACG CAGCGGCCTT GGTGATCGTC ATTTCCAAGA CCACCTTCGT CGCCCCCGGC
GCAAGCGAAG AGAGCCCGGC TCTATGGCAC ACCTTCGACA CGGGTTCGGC ATGGGGTTAC
CTGGCACTGC AGGCCAGCCT GAGCGGCTGG CACACCCACG GCATGGCCGG TTTCGATCAG
GACCTGACCC GCAAGGAGTT GAATATTCCC GAGGGCTACG CAGTGCACGC GGCCGTCGCG
ATTGGCAAGC TGGGTGACAA ATCGACCCTG CCGGACTACC TGCAAGGCCG CGAAGTGCCA
AGCCCGCGCA AGCCGCTGGC AGAACTGGCC GCCGAAGGTG ATTTTTCGCT GTAA
 
Protein sequence
MSTNPRIADH PIDPQFTERW SPRAFNGQSI DQETLLSFFE AARWAPSAYN SQPWRFLYAR 
RDTPNWERYL GLLNEFNRSW AQHAAALVIV ISKTTFVAPG ASEESPALWH TFDTGSAWGY
LALQASLSGW HTHGMAGFDQ DLTRKELNIP EGYAVHAAVA IGKLGDKSTL PDYLQGREVP
SPRKPLAELA AEGDFSL