Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1566 |
Symbol | |
ID | 3367066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1762508 |
End bp | 1763101 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651907 |
Product | nitroreductase |
Protein accession | YP_234652 |
Protein GI | 66044811 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00494476 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACGA ACCCTCGCAT CGCCGATCAC CCGATCGACC CGCAATTCAC CGAACGCTGG TCGCCACGTG CCTTCAACGG CCAAAGCATC GACCAGGAAA CCTTGCTGAG CTTTTTCGAA GCCGCACGCT GGGCGCCATC GGCGTATAAC TCGCAGCCTT GGCGCTTTCT CTATGCACGT CGCGATACGC CGAACTGGGA GCGTTACCTG GGCTTGCTGA ACGAGTTCAA TCGCAGTTGG GCGCAACACG CAGCGGCCTT GGTGATCGTC ATTTCCAAGA CCACCTTCGT CGCCCCCGGC GCAAGCGAAG AGAGCCCGGC TCTATGGCAC ACCTTCGACA CGGGTTCGGC ATGGGGTTAC CTGGCACTGC AGGCCAGCCT GAGCGGCTGG CACACCCACG GCATGGCCGG TTTCGATCAG GACCTGACCC GCAAGGAGTT GAATATTCCC GAGGGCTACG CAGTGCACGC GGCCGTCGCG ATTGGCAAGC TGGGTGACAA ATCGACCCTG CCGGACTACC TGCAAGGCCG CGAAGTGCCA AGCCCGCGCA AGCCGCTGGC AGAACTGGCC GCCGAAGGTG ATTTTTCGCT GTAA
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Protein sequence | MSTNPRIADH PIDPQFTERW SPRAFNGQSI DQETLLSFFE AARWAPSAYN SQPWRFLYAR RDTPNWERYL GLLNEFNRSW AQHAAALVIV ISKTTFVAPG ASEESPALWH TFDTGSAWGY LALQASLSGW HTHGMAGFDQ DLTRKELNIP EGYAVHAAVA IGKLGDKSTL PDYLQGREVP SPRKPLAELA AEGDFSL
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