Gene Psyr_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1560 
Symbol 
ID3367060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1755465 
End bp1755947 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content56% 
IMG OID637651901 
Productgas vesicle protein, putative 
Protein accessionYP_234646 
Protein GI66044805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00494476 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGACG TAGATCAGGT ACAAAAGTCG CAACCTTCTC CCAGCCAGAG CCACGATGAC 
GTGATTGCTC AGTTCAAGTG GCAGGGCAAG CAGATCGACT GGTTGCTGCA ATGGCTGGTC
AAGTTTGTTG CCAACACCAA GGTTGAGATG GGCGTGACGC TGTCGGTGGG CGGGAATCTG
GTTTCCGGGC ATCTGATTTC TCACGATGCA TATTTCGAGC AGTTGGCCGA CGATATCTCG
GCACCGTTCA GTTCGTTCGC CAACGGCACT GACGCGACCA TGAAAGAGAT GATCCTGTCC
TTCAAGCCCG GTGAGTCATC TGAAGACACC CCGGCCTTCC ATTTCATTCA CTTGAAGGAC
TGCCGCACCT ATTCCACTGA CGGCAACCCG ATTTGTGAGG CCGGTGTGCT GTGGCGGGGC
CGGATCTCGG CAGTCGATGG GTTCACCATC GGGCTTATTG CTGAAAAGCC TGGCGCAGCC
TGA
 
Protein sequence
MSDVDQVQKS QPSPSQSHDD VIAQFKWQGK QIDWLLQWLV KFVANTKVEM GVTLSVGGNL 
VSGHLISHDA YFEQLADDIS APFSSFANGT DATMKEMILS FKPGESSEDT PAFHFIHLKD
CRTYSTDGNP ICEAGVLWRG RISAVDGFTI GLIAEKPGAA