Gene Psyr_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1541 
Symbol 
ID3367040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1734939 
End bp1735520 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID637651882 
Producthypothetical protein 
Protein accessionYP_234628 
Protein GI66044787 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0551154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC ATCTTGACCT CAACGCGCTG ATCGCCGCCT ACGGCTATTG GGTCATTTTC 
CTGGGCTGTT TGCTGGAAGG CGAAACAGTG TTGATCCTTG GTGGTATGGC TGCGCACCAA
GGTGCTCTGC AATTGCTGCA AGTGATCGGC TTGGCCACGT TGGGCGGTAT GCTCGGCGAT
CAGTTGCTAT TCTGGACCGG ACGTTATTCC GGGGAGCGCC TGCTGCCCAG ACTCAAACGT
CACCAATCTG CCATCAAGCG GGTCGAGGGT CTTATCCAGC GTTACCCCAC GACCTCCGTA
TTCGCTGTTC GCTTCCTCTA CGGCATGCGC CTGGTGGGGC CTATGGTGAT AGGTGCAAGT
GGCCTGTCAC CCTGGCGTTT CGCCCTGATC AATGTGCTGA GTGCGGCAGT CTGGGCAACC
CTGTTCGTCT GCGCCGGCTA TTGGGCGGGG GAAGCGTTAC AGCATCTACT CGGCGACCTG
AAGCCCTATC GTCTGCCGAT CTTCCTCGCG GTGGTAGCAC TGGTGATTCT TGCTGCGTTG
GTGCGGTATG TGCACCGCCG ATCCAGGGCA ACGGATCGTT GA
 
Protein sequence
MFEHLDLNAL IAAYGYWVIF LGCLLEGETV LILGGMAAHQ GALQLLQVIG LATLGGMLGD 
QLLFWTGRYS GERLLPRLKR HQSAIKRVEG LIQRYPTTSV FAVRFLYGMR LVGPMVIGAS
GLSPWRFALI NVLSAAVWAT LFVCAGYWAG EALQHLLGDL KPYRLPIFLA VVALVILAAL
VRYVHRRSRA TDR