Gene Psyr_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1531 
Symbol 
ID3367030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1720372 
End bp1721718 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content54% 
IMG OID637651873 
ProductDnaB helicase 
Protein accessionYP_234619 
Protein GI66044778 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.498152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTT CTCATATGTC ACCTCCCCAC TCCGTGGAAG CCGAACAAGC TGTGCTTGGC 
GGACTGATGC TTGATAACGA TTCCTGGGAC CTGATCGCAG ACCGTATTAA AGCCGATGAT
TTCTACCGGG CCGAGCACCG TCTGATATTC CAGAGCATTG CTGGGCTGGC TGAATCGAAC
AGGCCATTTG ACGTGGTCAC GGTTTCCGAC TCCATTACAG CAATAGATGC TGCTGGGGGC
TTGGCTTATC TCAGTGAGCT CGCCAAAAAC ACGCCTTCTG TGGCCAACAT CAAGGCTTAT
GCAGAAACAG TGAGTAACCG AGCTCATCTA CGCCGGATTA TTTCACACGG CTATGCATGT
ACCCGGGAGG CTTCAGATCC TCAAGCGAAT GCGTCTGAGG TTCAGGACGT CATCGAGCAG
CAACTTTTTG CTTTGGGGCA AGGACGGCAG ACTTCCGACT TTGTGGACGT CAACCAGATG
CTTATGCAGG TGGTCGACAA GATCGATCTT CGCTTCAACG CTGGGGAGTC GGTCGTTGGA
TTGCCCACAG GGCTTTCCGA TCTTGATGAA TTGACGGGCG GACTACAACC AGCCGATCTG
ATCATCATTG CGGCCAGACC CTCCATGGGC AAAACCAGCC TGGCGCTCAA CTTGGTAGAC
GCTGCGCTTC AAAAAGATAC TCAGGCCACT GTTCAGGTCT ACAGCCTCGA GATGCCGGCA
GAGGCGATCA TTTACAGGCT CATCTCGATC CTGGGGCACC TGAACCTGGA GAAGTTGATA
CGCGGGCAGT TGGAGGATGA GGACTGGCCG AAGCTCGCGA TGGCAGTGCA AAAGATCAAC
TCGTATGGCG ATCGCCTTGT AATTGATGAT CAAGCTGACC TCACTCCCTC GGCAATTCGT
GCGCGGGCTC GCAGAGGCGC ACGGCGTTTC GGAAAGCCAG TCCTGATATT GATCGATTAT
CTGCAAATGA TGAAATGTCC AGGTAAAGAA AATCGGACCA ATGAAATCAG TGAGATATCT
CGGTCACTCA AGGCTTTGGC CAAAGAGTTC GACTGTCCTG TCGTGGCGCT CTCTCAGCTC
AACAGAGAAC TTGAGCGGCG TCCGAACAAG CGACCTATCA ATGCAGACCT CCGTGAGTCG
GGCGCGCTTG AGCAAGACGC TGACCTGATT CTGTTCGTAT ATCGGGACGA GGTTTACAAC
CCCGACAGCG AGCAAAAAGG GGTCGCCGAA CTCATTCTCA GCAAGCATCG AAACGGCGCG
CTCGGCACCG TCCGAACGGC CTTCATCCCC CAACACACCC GTTTCGAAAA CCTCTCGGCC
GCCGCATGGC AAGGAGCTCG ATCATGA
 
Protein sequence
MDISHMSPPH SVEAEQAVLG GLMLDNDSWD LIADRIKADD FYRAEHRLIF QSIAGLAESN 
RPFDVVTVSD SITAIDAAGG LAYLSELAKN TPSVANIKAY AETVSNRAHL RRIISHGYAC
TREASDPQAN ASEVQDVIEQ QLFALGQGRQ TSDFVDVNQM LMQVVDKIDL RFNAGESVVG
LPTGLSDLDE LTGGLQPADL IIIAARPSMG KTSLALNLVD AALQKDTQAT VQVYSLEMPA
EAIIYRLISI LGHLNLEKLI RGQLEDEDWP KLAMAVQKIN SYGDRLVIDD QADLTPSAIR
ARARRGARRF GKPVLILIDY LQMMKCPGKE NRTNEISEIS RSLKALAKEF DCPVVALSQL
NRELERRPNK RPINADLRES GALEQDADLI LFVYRDEVYN PDSEQKGVAE LILSKHRNGA
LGTVRTAFIP QHTRFENLSA AAWQGARS