Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1531 |
Symbol | |
ID | 3367030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1720372 |
End bp | 1721718 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637651873 |
Product | DnaB helicase |
Protein accession | YP_234619 |
Protein GI | 66044778 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.498152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.108939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTT CTCATATGTC ACCTCCCCAC TCCGTGGAAG CCGAACAAGC TGTGCTTGGC GGACTGATGC TTGATAACGA TTCCTGGGAC CTGATCGCAG ACCGTATTAA AGCCGATGAT TTCTACCGGG CCGAGCACCG TCTGATATTC CAGAGCATTG CTGGGCTGGC TGAATCGAAC AGGCCATTTG ACGTGGTCAC GGTTTCCGAC TCCATTACAG CAATAGATGC TGCTGGGGGC TTGGCTTATC TCAGTGAGCT CGCCAAAAAC ACGCCTTCTG TGGCCAACAT CAAGGCTTAT GCAGAAACAG TGAGTAACCG AGCTCATCTA CGCCGGATTA TTTCACACGG CTATGCATGT ACCCGGGAGG CTTCAGATCC TCAAGCGAAT GCGTCTGAGG TTCAGGACGT CATCGAGCAG CAACTTTTTG CTTTGGGGCA AGGACGGCAG ACTTCCGACT TTGTGGACGT CAACCAGATG CTTATGCAGG TGGTCGACAA GATCGATCTT CGCTTCAACG CTGGGGAGTC GGTCGTTGGA TTGCCCACAG GGCTTTCCGA TCTTGATGAA TTGACGGGCG GACTACAACC AGCCGATCTG ATCATCATTG CGGCCAGACC CTCCATGGGC AAAACCAGCC TGGCGCTCAA CTTGGTAGAC GCTGCGCTTC AAAAAGATAC TCAGGCCACT GTTCAGGTCT ACAGCCTCGA GATGCCGGCA GAGGCGATCA TTTACAGGCT CATCTCGATC CTGGGGCACC TGAACCTGGA GAAGTTGATA CGCGGGCAGT TGGAGGATGA GGACTGGCCG AAGCTCGCGA TGGCAGTGCA AAAGATCAAC TCGTATGGCG ATCGCCTTGT AATTGATGAT CAAGCTGACC TCACTCCCTC GGCAATTCGT GCGCGGGCTC GCAGAGGCGC ACGGCGTTTC GGAAAGCCAG TCCTGATATT GATCGATTAT CTGCAAATGA TGAAATGTCC AGGTAAAGAA AATCGGACCA ATGAAATCAG TGAGATATCT CGGTCACTCA AGGCTTTGGC CAAAGAGTTC GACTGTCCTG TCGTGGCGCT CTCTCAGCTC AACAGAGAAC TTGAGCGGCG TCCGAACAAG CGACCTATCA ATGCAGACCT CCGTGAGTCG GGCGCGCTTG AGCAAGACGC TGACCTGATT CTGTTCGTAT ATCGGGACGA GGTTTACAAC CCCGACAGCG AGCAAAAAGG GGTCGCCGAA CTCATTCTCA GCAAGCATCG AAACGGCGCG CTCGGCACCG TCCGAACGGC CTTCATCCCC CAACACACCC GTTTCGAAAA CCTCTCGGCC GCCGCATGGC AAGGAGCTCG ATCATGA
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Protein sequence | MDISHMSPPH SVEAEQAVLG GLMLDNDSWD LIADRIKADD FYRAEHRLIF QSIAGLAESN RPFDVVTVSD SITAIDAAGG LAYLSELAKN TPSVANIKAY AETVSNRAHL RRIISHGYAC TREASDPQAN ASEVQDVIEQ QLFALGQGRQ TSDFVDVNQM LMQVVDKIDL RFNAGESVVG LPTGLSDLDE LTGGLQPADL IIIAARPSMG KTSLALNLVD AALQKDTQAT VQVYSLEMPA EAIIYRLISI LGHLNLEKLI RGQLEDEDWP KLAMAVQKIN SYGDRLVIDD QADLTPSAIR ARARRGARRF GKPVLILIDY LQMMKCPGKE NRTNEISEIS RSLKALAKEF DCPVVALSQL NRELERRPNK RPINADLRES GALEQDADLI LFVYRDEVYN PDSEQKGVAE LILSKHRNGA LGTVRTAFIP QHTRFENLSA AAWQGARS
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