Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1525 |
Symbol | |
ID | 3367024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1715223 |
End bp | 1716596 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637651867 |
Product | hypothetical protein |
Protein accession | YP_234613 |
Protein GI | 66044772 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0641045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0989944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATAAGGA TGAACCGGCG CCCTTCTCTG GGGGGAGCCA TTAATGCCGC TGCCGGGGCT CTACAAAATC ATCTGCTGCT CCAGCAATTA AAGCTGGCCC AACAGCAGAG CTCTGGCTCA GATAATAGGA AGTCGGTTGC TGGCTCAGAT ACTGAGGACA CACTCGACGG TATCGTTTTC AGTGGAAATC CACATGAGAC GGTGCCGCGA AGCCTCCTGC TTGATGATCG ACTTTCACCG CTTGAGCGCA ATGCTTGGCA AGTCTTCAGA CTGCTTATTA ACGCAGATGG CATCACAGCC TTTCCGACTT ATGAACAACT TCGTCCCTAC CTTGGCTCAG TCCCAGGAAA ATTCGCATCC AGAGAGACTG TAGCGAAGGC TCTGACAGTG CTTCGCTTGA CGCGCTGGCT TAGTCTTGGA CGGCGAGTAA GAGACTCTCT GAGCGGTCGA ATGCAGGGAA ACGTCTACAT CCTGCATGAC GAACCGGTCG GGTGTGTTGA GGCTATGGAG CTTGATCGCG ACTACCTGTT GCTTGTAGGC CATTCCCTCG AGCATGCAAA TAAAGCTGTC AGGACCGTGG CAGATTTGGC ATTCAAAGAA TTCGCAGCCG ACCCTAATCA ATCGACAGGT ATGCTGCCCA CGCGGCTTGA TGTCATTGAG GGTAGATGGC GTAGTCAGGG TTGGCATGAT GCACCGAATG CCGTGGATCG CGAAGAAAAC CAGCCTGAGT TCGGAATCCG AACTCAGCAA GAAAGCGGGC CCTCAGCACT GAGTTCGGAT TCCGAACTCA GTAAAATCAG CGAGAAAGCG AATCTCGAAA GACCGAGTTC GGAATCCGAA CTCAGTCTAA AATCAGCATC ATTCGGCACA GTTCGGATTC CGAACTCATA TAGTACGTAT ACGAATACAA ATACATCTGT ATGTAAAAGC TCTGTACCGC GCGAGGCTGT GAGCGCTCCA GTCGATCTAC CTCCAGGGTT TGAAAGGTTT ACTGAGGATC AACGCTTCAG GGCGATGACC GCATTGCAGA GCGTCGAGCC GACACTGCGA GAACCGTTGC TTGATCAATG GCGCCATCGT TGCAATAGCG GTTCCGTGAA GAACCCATTC GGTTATCTGT TGAGCTGCAT GCAGAAAGCC CTGAGTGGGG AATTCAACGC CCAGTGGCAG GCTCCTAGAG CGTCAGCTCA AAATCCACAG GCGCACTCCC CCCAGCCGAA ACATCTCAGC AACGCGCCTG ATCAACCAAA GCCAACTCCC CCGCCTCCCG TCAAAAAAGT CTCGCCGCAA GATCGTGACG AGTCTTCACT GGCTGCCGGG CGCAGCTCAA TGATGGACAT CAAGCGGATA ATTCGACCGA GATCACAGGG TTGA
|
Protein sequence | MIRMNRRPSL GGAINAAAGA LQNHLLLQQL KLAQQQSSGS DNRKSVAGSD TEDTLDGIVF SGNPHETVPR SLLLDDRLSP LERNAWQVFR LLINADGITA FPTYEQLRPY LGSVPGKFAS RETVAKALTV LRLTRWLSLG RRVRDSLSGR MQGNVYILHD EPVGCVEAME LDRDYLLLVG HSLEHANKAV RTVADLAFKE FAADPNQSTG MLPTRLDVIE GRWRSQGWHD APNAVDREEN QPEFGIRTQQ ESGPSALSSD SELSKISEKA NLERPSSESE LSLKSASFGT VRIPNSYSTY TNTNTSVCKS SVPREAVSAP VDLPPGFERF TEDQRFRAMT ALQSVEPTLR EPLLDQWRHR CNSGSVKNPF GYLLSCMQKA LSGEFNAQWQ APRASAQNPQ AHSPQPKHLS NAPDQPKPTP PPPVKKVSPQ DRDESSLAAG RSSMMDIKRI IRPRSQG
|
| |