Gene Psyr_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1525 
Symbol 
ID3367024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1715223 
End bp1716596 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content53% 
IMG OID637651867 
Producthypothetical protein 
Protein accessionYP_234613 
Protein GI66044772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0641045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0989944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAGGA TGAACCGGCG CCCTTCTCTG GGGGGAGCCA TTAATGCCGC TGCCGGGGCT 
CTACAAAATC ATCTGCTGCT CCAGCAATTA AAGCTGGCCC AACAGCAGAG CTCTGGCTCA
GATAATAGGA AGTCGGTTGC TGGCTCAGAT ACTGAGGACA CACTCGACGG TATCGTTTTC
AGTGGAAATC CACATGAGAC GGTGCCGCGA AGCCTCCTGC TTGATGATCG ACTTTCACCG
CTTGAGCGCA ATGCTTGGCA AGTCTTCAGA CTGCTTATTA ACGCAGATGG CATCACAGCC
TTTCCGACTT ATGAACAACT TCGTCCCTAC CTTGGCTCAG TCCCAGGAAA ATTCGCATCC
AGAGAGACTG TAGCGAAGGC TCTGACAGTG CTTCGCTTGA CGCGCTGGCT TAGTCTTGGA
CGGCGAGTAA GAGACTCTCT GAGCGGTCGA ATGCAGGGAA ACGTCTACAT CCTGCATGAC
GAACCGGTCG GGTGTGTTGA GGCTATGGAG CTTGATCGCG ACTACCTGTT GCTTGTAGGC
CATTCCCTCG AGCATGCAAA TAAAGCTGTC AGGACCGTGG CAGATTTGGC ATTCAAAGAA
TTCGCAGCCG ACCCTAATCA ATCGACAGGT ATGCTGCCCA CGCGGCTTGA TGTCATTGAG
GGTAGATGGC GTAGTCAGGG TTGGCATGAT GCACCGAATG CCGTGGATCG CGAAGAAAAC
CAGCCTGAGT TCGGAATCCG AACTCAGCAA GAAAGCGGGC CCTCAGCACT GAGTTCGGAT
TCCGAACTCA GTAAAATCAG CGAGAAAGCG AATCTCGAAA GACCGAGTTC GGAATCCGAA
CTCAGTCTAA AATCAGCATC ATTCGGCACA GTTCGGATTC CGAACTCATA TAGTACGTAT
ACGAATACAA ATACATCTGT ATGTAAAAGC TCTGTACCGC GCGAGGCTGT GAGCGCTCCA
GTCGATCTAC CTCCAGGGTT TGAAAGGTTT ACTGAGGATC AACGCTTCAG GGCGATGACC
GCATTGCAGA GCGTCGAGCC GACACTGCGA GAACCGTTGC TTGATCAATG GCGCCATCGT
TGCAATAGCG GTTCCGTGAA GAACCCATTC GGTTATCTGT TGAGCTGCAT GCAGAAAGCC
CTGAGTGGGG AATTCAACGC CCAGTGGCAG GCTCCTAGAG CGTCAGCTCA AAATCCACAG
GCGCACTCCC CCCAGCCGAA ACATCTCAGC AACGCGCCTG ATCAACCAAA GCCAACTCCC
CCGCCTCCCG TCAAAAAAGT CTCGCCGCAA GATCGTGACG AGTCTTCACT GGCTGCCGGG
CGCAGCTCAA TGATGGACAT CAAGCGGATA ATTCGACCGA GATCACAGGG TTGA
 
Protein sequence
MIRMNRRPSL GGAINAAAGA LQNHLLLQQL KLAQQQSSGS DNRKSVAGSD TEDTLDGIVF 
SGNPHETVPR SLLLDDRLSP LERNAWQVFR LLINADGITA FPTYEQLRPY LGSVPGKFAS
RETVAKALTV LRLTRWLSLG RRVRDSLSGR MQGNVYILHD EPVGCVEAME LDRDYLLLVG
HSLEHANKAV RTVADLAFKE FAADPNQSTG MLPTRLDVIE GRWRSQGWHD APNAVDREEN
QPEFGIRTQQ ESGPSALSSD SELSKISEKA NLERPSSESE LSLKSASFGT VRIPNSYSTY
TNTNTSVCKS SVPREAVSAP VDLPPGFERF TEDQRFRAMT ALQSVEPTLR EPLLDQWRHR
CNSGSVKNPF GYLLSCMQKA LSGEFNAQWQ APRASAQNPQ AHSPQPKHLS NAPDQPKPTP
PPPVKKVSPQ DRDESSLAAG RSSMMDIKRI IRPRSQG