Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1508 |
Symbol | |
ID | 3367007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1694121 |
End bp | 1695080 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651850 |
Product | Phage integrase:Phage integrase, N-terminal SAM-like |
Protein accession | YP_234596 |
Protein GI | 66044755 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGGAG AATTGATCTC AATTGAGGAT GGCGGACGTC GGCTTACGGC GGCGGAGTTC CAGCAACTGA CGGCTGTACC CTCAGCCGTG GAGTGGTTTG CCAATATCGA TAATCCACGT ACCCGCCGGG CGTATCAGAT CGACCTACAA GACTTCTGCA GTTTCGTCGG CTTGGCCGGG GCCGAAGAGT TTCGGGCCGT GACGCGCGCA CATGTCCTGG CCTGGCGCGC TCGGTTGGAG AAGCGTGGTC TGGCCGGAGC AACGATCCGG CGTAAACTCG CCGCGCTTGC CAGCCTGTTT GATCATCTGC TCGAGAACAA TGCAGTGGCA GGGGGCAATC CGGTCCACGG CGTCAAGCGG CCCCGGATCG AAAGCAACGA AGGGAAGACG CCCGCGCTCG CGGACCACCA GGCCAAGGCG CTTCTCGATG CGCCGCCGGC TGACAGCCTC AAGGGACTAC GAGATCGTGC TGTGCTGGCC GTGCTGCTGT ACCACGGCCT GCGCCGGGAG GAGGGCGCGC AGTTGAAAAC CAGCGACTTG CAGGAGCGAC GGGGCATTAA GCACCTGCGG GTGAACGGCA AAGGCGGCAA GCTGCGCTGG CTACCGCTGC ACCCCGTGGC CGCCGAACGT ATCTACGCAT ATATGGAAAA GGATCTTGAG CGAGGAGCAG GGAATGGGTC GCTGTTTAGG TCACTACGAG GTCGCGCCTC TGGTACCGGG CTGAGCGCCG ATGGCATTTA TAAGATCGTG TGTCATTGGG CGATGTCTGC CGGCATCAAG GTTGATGGTC TGGGCGTCCA TGGTTTGCGG GCCACGGCGG CTACAAACGC GCTTGAGCAT GACGCGGACA TTGCCAAGGT GCAGATCTGG CTGGGGCACG CAAACATCAG CACGACGCGT TTGTATGATC GGCGCGGCCA GCGACCGGAA GACTCTCCGA CGTTTAAAGT CAAATACTGA
|
Protein sequence | MPGELISIED GGRRLTAAEF QQLTAVPSAV EWFANIDNPR TRRAYQIDLQ DFCSFVGLAG AEEFRAVTRA HVLAWRARLE KRGLAGATIR RKLAALASLF DHLLENNAVA GGNPVHGVKR PRIESNEGKT PALADHQAKA LLDAPPADSL KGLRDRAVLA VLLYHGLRRE EGAQLKTSDL QERRGIKHLR VNGKGGKLRW LPLHPVAAER IYAYMEKDLE RGAGNGSLFR SLRGRASGTG LSADGIYKIV CHWAMSAGIK VDGLGVHGLR ATAATNALEH DADIAKVQIW LGHANISTTR LYDRRGQRPE DSPTFKVKY
|
| |