Gene Psyr_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1498 
Symbol 
ID3366997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1686402 
End bp1687781 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content59% 
IMG OID637651840 
Productheavy metal sensor kinase 
Protein accessionYP_234586 
Protein GI66044745 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG GCTCACTCAC CCTGCGCTTA AGCCTTCTGT TTGTGGTCGC GGTCGCCGTC 
GTCCTTATCA TCGTGGGGGT CGCCTTCAAC GAACTGAGCC GTCACCACTT CCGCGCCCTG
GATGCGCAGA CACTGGGAGA AAAGCTCGAA GCGATTAACC AGATCGCCAT TGAATCAGGC
TCGAACCCGG ACCTGCTCGA GGCGCGCTGG CACACCCTCC TTGGGGCCCA TCCCGACCTC
AGCGCTGTAT TTCTGAAGAC GGATGGGACG CCTTTTTTTG CAGAACCTCC CCAATCAGCG
GCGCCATCGC TCACGCAGGC CACCCAGCGC GATGGCGTCT GGGAGTGGGA AAACAAAGGC
CGCATGTTTA GGGCATTGAC TGCCTCGGTA TCGTTACCCA CTGCCAGCCC ACCATTGACC
GTGTGGCTTG TCCTGGACGT CACCACGCAT ATGCACTTCT TTGCCATGCT TGAACGCTGG
TTCTGGGGCG TTCTATTGGC TAGTACCGCG TTAAGCGCGG CCCTCGGGTG GCTGGTCGCC
AAGAACGGAC TGCGGCCGGT GGCAAGGGTG ACCCAGACCG CCGCCTCAAT GTCCGCTGGC
TCGCTGAAGG AACGCATTCC CTTGGGGCCG GTACCGGATG AGTTGCGTGA GCTCATCACC
GCGTTCAATT CCATGCTTGG TCGCCTGGAC GATTCCTTTG TGCGCCTATC GAATTTCTCT
GCTGACATTG CGCACGAGCT TCGTACCCCG ATCAGCAACC TGCGGACCCA CACCGAGGTG
ATCCTGGCCA AAAAGCGTGC GCCCGAGGTG TACGAAGAGA ATCTGAGCTC CAATCTGGAA
GAGCTCAATC GTCTTTCGGG TATCATCGAC GGCATGCTGT TCCTGGCCAA GTCTGATAAC
GGGCTAATTG TGCCCGAGGC TGTTGAACTG GATCTGAGAA CAGTCATCAG CAAGCTGTTC
GGCTATTACG AGTTTCTGGC CGAGGACAAG GGGATTCAGC TACAAGCATC AGGCAACGCC
TCGATCTTCG CTGACAGCGT GATGATCGAC CGTATCGTGT CGAACCTGCT GTCCAATGCC
CTGCGCTATA CGCCGTCCGG AGAGACGATC AAGGTCAGCA TCCACGATCA CGGAGGAAGG
GTAGAGCTTC GGTTGGAAAA TCCTGGCCCT GAAATAGCAC CGCAGCACCT GGACCGCATC
TTTGACCGGT TCTACCGGGT TGATCCGGCG CGGCGCGAAG GCGCCGGGAA TGCGGGGCTG
GGGCTGGCGA TTGCCCGGTC CTTGATGCAA GCGCATGGCG GTACTATCTC GTGTACATCC
CACGAGGGCC GAACGACCTT CATCCTCACC TTCGTGCGGT CATCTGGCCC ACGAACATGA
 
Protein sequence
MKPGSLTLRL SLLFVVAVAV VLIIVGVAFN ELSRHHFRAL DAQTLGEKLE AINQIAIESG 
SNPDLLEARW HTLLGAHPDL SAVFLKTDGT PFFAEPPQSA APSLTQATQR DGVWEWENKG
RMFRALTASV SLPTASPPLT VWLVLDVTTH MHFFAMLERW FWGVLLASTA LSAALGWLVA
KNGLRPVARV TQTAASMSAG SLKERIPLGP VPDELRELIT AFNSMLGRLD DSFVRLSNFS
ADIAHELRTP ISNLRTHTEV ILAKKRAPEV YEENLSSNLE ELNRLSGIID GMLFLAKSDN
GLIVPEAVEL DLRTVISKLF GYYEFLAEDK GIQLQASGNA SIFADSVMID RIVSNLLSNA
LRYTPSGETI KVSIHDHGGR VELRLENPGP EIAPQHLDRI FDRFYRVDPA RREGAGNAGL
GLAIARSLMQ AHGGTISCTS HEGRTTFILT FVRSSGPRT