Gene Psyr_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1492 
Symbol 
ID3366991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1680090 
End bp1681052 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content59% 
IMG OID637651834 
ProductPhage integrase:Phage integrase, N-terminal SAM-like 
Protein accessionYP_234580 
Protein GI66044739 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC TGACGAAAGC CCATCACAAT GATCACCGTC GGCTCACTTC GGTCGAATTT 
CAGACGCTGG CCCAAGTTCC GGCCGCCGTC GAGTGGTTTG CCAACTTGGA CAACCCTCGG
ACCCGACGTG CCTACCAAAA TGACCTGGAA GACTTCTGCG GTTTTGTTGG ATTGGTTTCG
GCCGATGAAT TTCGCGTCGT GACCCGATCA CACGTTCTGG CCTGGCGTGC CCAGCTCGAG
CATCGCGGCT TAGCCGGAGC CACGATCCGG CGCAAATTGG CCGCGCTGGC CAGCCTCTTT
GATCACCTCC TGGAAAGCAA CGCGATCGCC GGCGGCAATC CCGTGCATGG TGTAAAACGA
CCGAAGATAG AAAGCAACGA AGGCAAGACA CCGGCACTGG GCGATCACCA GGCTAAAGCG
CTGCTCGACG CGCCGGATGA AACAACACTT AAAGGGCAGC GCGACCGGGC GATATTGGCT
GTTCTTCTCT ATCACGGGCT GCGCCGTGAA GAAGCAGCGC TGCTGCAGGT GAGCGACATC
CAGGAGCGCC GCGGCATTCA GCATTTAAAG GTCCACGGCA AAGGCGGAAA GGTACGTTAC
CTGCCGTTGC ACCCCGTGGC GGCCGGTCGT ATTCACCTGT TTCTGGAAAG CTCAGGGCAT
CATTTGGCGG ACAGGAAGGT GCCATTGTTC ATGCCGCTGC GGGGCAAGCT GACCGGCGCC
GGCATCACGG CTAACGGCAT CTATACCGTG GTGGCGGCGT ATGCGAAGAA GGCCGGGATC
GAGGTCGACG GCTTAGGGGT CCACGGACTC AGAGCAACCG CAGCTACCAA TGCACTGGAG
CATGAAGCCG ACATCGCCAA GGTCCAGGCC TGGCTCGGCC ATGCCAATAT CAGCACCACC
AAGATCTATG ATCGCCGGGA GAACCGGCCG GAGGATTCAC CCACCTATAA AGTGAAGTAT
TAA
 
Protein sequence
MQELTKAHHN DHRRLTSVEF QTLAQVPAAV EWFANLDNPR TRRAYQNDLE DFCGFVGLVS 
ADEFRVVTRS HVLAWRAQLE HRGLAGATIR RKLAALASLF DHLLESNAIA GGNPVHGVKR
PKIESNEGKT PALGDHQAKA LLDAPDETTL KGQRDRAILA VLLYHGLRRE EAALLQVSDI
QERRGIQHLK VHGKGGKVRY LPLHPVAAGR IHLFLESSGH HLADRKVPLF MPLRGKLTGA
GITANGIYTV VAAYAKKAGI EVDGLGVHGL RATAATNALE HEADIAKVQA WLGHANISTT
KIYDRRENRP EDSPTYKVKY