Gene Psyr_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1488 
Symbol 
ID3366987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1675584 
End bp1676327 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content55% 
IMG OID637651830 
Productbile acid:sodium symporter 
Protein accessionYP_234576 
Protein GI66044735 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGAG AACAGCTAGA GACTAACCAG ATTCCCATTT ACTTCGTCGC GGTCATTGTC 
GCGGCCCTCG GAGGCCTGCT CGCCCCCAAT GCGTCTGAAG CATTAGGGTC GACGGTGACA
CCCACCATCG CAGTGCTGAT GTACGCCATG TTTCTACAGA TCCCGTTCTT GGATCTCCGT
AATGGCCTCG CAAATAAGCG TTTCATGGCG GCGCTGCTCA CAGCCAACTT CGTGGCCATC
CCCTTGCTGG TTTGGGCATT GACGATGGGG ATAACCAATC ACCCGGCGAT TTTGGTGGGT
GCCCTGTTGG TCTTGCTGAC GCCTTGTATC GACTATGTGG TGGTTTTTAC CCATATCGGT
AAAGGCGACT CCAAACTCAC TCTGGCGGCC ACCCCATTGC TTCTTTTGAT GCAGCTTGTA
CTGCTGCCGG TGTACCTGAC CTTCATGCTG GGTAACGACT CAACAGTGGT CATTTCTATA
GGCCCATTTG TTGAGGCCTT TGTGATGCTG ATCGCTTTGC CTTTGGTCTT AGCGGTAGCA
ACAGCTGCCG GGGCAAAGAG ATCACGCATC GTTGAAAGCT GGAACAACGC ATGGGCCTGG
ATGCCTGTAC CGGCTATGGC GGCTGTATTG GTCGTGATGG GTAGGCTGCC CTGGGCGCTA
GGCTCAGTTT CACTACACGT CGTGGGCTCG CTGGTAATGA CGGCTGCCGG GCTTCTGTCC
TATCAAATAA TCAACACGCG CTGA
 
Protein sequence
MDREQLETNQ IPIYFVAVIV AALGGLLAPN ASEALGSTVT PTIAVLMYAM FLQIPFLDLR 
NGLANKRFMA ALLTANFVAI PLLVWALTMG ITNHPAILVG ALLVLLTPCI DYVVVFTHIG
KGDSKLTLAA TPLLLLMQLV LLPVYLTFML GNDSTVVISI GPFVEAFVML IALPLVLAVA
TAAGAKRSRI VESWNNAWAW MPVPAMAAVL VVMGRLPWAL GSVSLHVVGS LVMTAAGLLS
YQIINTR