Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1486 |
Symbol | |
ID | 3366985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1673655 |
End bp | 1675001 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651828 |
Product | Cl- channel, voltage gated |
Protein accession | YP_234574 |
Protein GI | 66044733 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAT TTCGACGACC TGAACAACTC GACTTACTGC CCTATATAGC GAAATGGCTT GCGCTTGCTG GTCTTGTAGC TCTTTTGGCA GGCTCTGCTT CTGCGTTATT CCTGCTTTCT TTGGATCATG CCACCCAGTG GCGAGAAACC CATCCCTGGG TAATCTGGCT CCTGCCAGTG GCCGGCTTTG CTGTGGGACT TGCATATCAC TTGATAGGCA AACCCGTTGA TGCCGGAAAC AACCTGATCA TCGATGAGAT CCATGATCCT AAGAAGATCG TGCCTTTGCG CATGGTGCCG ATGGTGCTGA TCGGAACCGT GGTTTCCCAC CTTTTTGGTG CATCTGTGGG ACGTGAGGGG ACGGCGGTGC AAATGGGCGG TGCCCTTGCC GATCAACTGA CGCATGTCTT CCGTCTGCGC CGCGAAGACC GTCGGGTGAT TCTCATGGCC GGTATCAGTG CTGGCTTTGC GTCCGTCTTC GGCACCCCTC TTGCCGGGGC TTTATTCGGA CTTGAAGTAT TGGCCATTGG ACGTATGCGT TACGACGCGC TTTTCCCTTG CGTGGTTGCG GCAATCGTTG CTGACCAGGT GGGGCAAGCC TGGGGCGTGG TTCACACGCA TTACGTCATT GGCGAAGTGG TTCCGGTGCA GCTGTGGAGC GTCATGGCTG TGGTGGCAGC TGGGATTGTC TTTGGCCTTA CCGGCCTGCT ATTCGCGACT GCGACCCACA AGCTCGGAGC CTTCGTTAAG CGGCTTATCA CCTATTCACC ATTAAGACCC TTCGCCGGCG GCCTGCTGAT CGCAGTCGCA GTGTGGGCGC TCGGTAGTAA CCATTACATC GACGTTGATA AGTACATCGG GCTAGGCATT CCGAGCATCG TCCAATCCTT TCAAATGCCA ATGGCCCCTT GGGACTGGCT TGGAAAGATG GTGTTCACCG TTGTCTCCCT GGGGACTGGA TTCAAGGGCG GCGAAGTCAC ACCGCTGTTT TACATCGGTG CCACCTTGGG GAATGCGCTG GCTCCCCTCT TGCACCTTCC CTTCGGCATG CTGGCTGGTA TCGGCTTTGT CGCCGTCTTT GCCGGTGCAG CTAATACGCC ACTGGCAACC ATCGTTATGG CCATGGAGCT CTTCGGGCCC GAAATTGCTC CGCTTGCAGC CATTGCCTGT ATCGCAAGTT ACCTCGTATC CGGACACACC GGGATCTATC ACGCCCAGCG CGTCGGCCAC AGCAAGCATC ACCGTCCTCT TCCGGAGGAA ATCCGGCTCT CTGATATCAA GCAATTTCAT GCTCAAAGTG AATCCGCCAG CGAGCGGAAA GTGACTCTTG CGGGGGAAGA GAAATGA
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Protein sequence | MSKFRRPEQL DLLPYIAKWL ALAGLVALLA GSASALFLLS LDHATQWRET HPWVIWLLPV AGFAVGLAYH LIGKPVDAGN NLIIDEIHDP KKIVPLRMVP MVLIGTVVSH LFGASVGREG TAVQMGGALA DQLTHVFRLR REDRRVILMA GISAGFASVF GTPLAGALFG LEVLAIGRMR YDALFPCVVA AIVADQVGQA WGVVHTHYVI GEVVPVQLWS VMAVVAAGIV FGLTGLLFAT ATHKLGAFVK RLITYSPLRP FAGGLLIAVA VWALGSNHYI DVDKYIGLGI PSIVQSFQMP MAPWDWLGKM VFTVVSLGTG FKGGEVTPLF YIGATLGNAL APLLHLPFGM LAGIGFVAVF AGAANTPLAT IVMAMELFGP EIAPLAAIAC IASYLVSGHT GIYHAQRVGH SKHHRPLPEE IRLSDIKQFH AQSESASERK VTLAGEEK
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