Gene Psyr_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1486 
Symbol 
ID3366985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1673655 
End bp1675001 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content56% 
IMG OID637651828 
ProductCl- channel, voltage gated 
Protein accessionYP_234574 
Protein GI66044733 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT TTCGACGACC TGAACAACTC GACTTACTGC CCTATATAGC GAAATGGCTT 
GCGCTTGCTG GTCTTGTAGC TCTTTTGGCA GGCTCTGCTT CTGCGTTATT CCTGCTTTCT
TTGGATCATG CCACCCAGTG GCGAGAAACC CATCCCTGGG TAATCTGGCT CCTGCCAGTG
GCCGGCTTTG CTGTGGGACT TGCATATCAC TTGATAGGCA AACCCGTTGA TGCCGGAAAC
AACCTGATCA TCGATGAGAT CCATGATCCT AAGAAGATCG TGCCTTTGCG CATGGTGCCG
ATGGTGCTGA TCGGAACCGT GGTTTCCCAC CTTTTTGGTG CATCTGTGGG ACGTGAGGGG
ACGGCGGTGC AAATGGGCGG TGCCCTTGCC GATCAACTGA CGCATGTCTT CCGTCTGCGC
CGCGAAGACC GTCGGGTGAT TCTCATGGCC GGTATCAGTG CTGGCTTTGC GTCCGTCTTC
GGCACCCCTC TTGCCGGGGC TTTATTCGGA CTTGAAGTAT TGGCCATTGG ACGTATGCGT
TACGACGCGC TTTTCCCTTG CGTGGTTGCG GCAATCGTTG CTGACCAGGT GGGGCAAGCC
TGGGGCGTGG TTCACACGCA TTACGTCATT GGCGAAGTGG TTCCGGTGCA GCTGTGGAGC
GTCATGGCTG TGGTGGCAGC TGGGATTGTC TTTGGCCTTA CCGGCCTGCT ATTCGCGACT
GCGACCCACA AGCTCGGAGC CTTCGTTAAG CGGCTTATCA CCTATTCACC ATTAAGACCC
TTCGCCGGCG GCCTGCTGAT CGCAGTCGCA GTGTGGGCGC TCGGTAGTAA CCATTACATC
GACGTTGATA AGTACATCGG GCTAGGCATT CCGAGCATCG TCCAATCCTT TCAAATGCCA
ATGGCCCCTT GGGACTGGCT TGGAAAGATG GTGTTCACCG TTGTCTCCCT GGGGACTGGA
TTCAAGGGCG GCGAAGTCAC ACCGCTGTTT TACATCGGTG CCACCTTGGG GAATGCGCTG
GCTCCCCTCT TGCACCTTCC CTTCGGCATG CTGGCTGGTA TCGGCTTTGT CGCCGTCTTT
GCCGGTGCAG CTAATACGCC ACTGGCAACC ATCGTTATGG CCATGGAGCT CTTCGGGCCC
GAAATTGCTC CGCTTGCAGC CATTGCCTGT ATCGCAAGTT ACCTCGTATC CGGACACACC
GGGATCTATC ACGCCCAGCG CGTCGGCCAC AGCAAGCATC ACCGTCCTCT TCCGGAGGAA
ATCCGGCTCT CTGATATCAA GCAATTTCAT GCTCAAAGTG AATCCGCCAG CGAGCGGAAA
GTGACTCTTG CGGGGGAAGA GAAATGA
 
Protein sequence
MSKFRRPEQL DLLPYIAKWL ALAGLVALLA GSASALFLLS LDHATQWRET HPWVIWLLPV 
AGFAVGLAYH LIGKPVDAGN NLIIDEIHDP KKIVPLRMVP MVLIGTVVSH LFGASVGREG
TAVQMGGALA DQLTHVFRLR REDRRVILMA GISAGFASVF GTPLAGALFG LEVLAIGRMR
YDALFPCVVA AIVADQVGQA WGVVHTHYVI GEVVPVQLWS VMAVVAAGIV FGLTGLLFAT
ATHKLGAFVK RLITYSPLRP FAGGLLIAVA VWALGSNHYI DVDKYIGLGI PSIVQSFQMP
MAPWDWLGKM VFTVVSLGTG FKGGEVTPLF YIGATLGNAL APLLHLPFGM LAGIGFVAVF
AGAANTPLAT IVMAMELFGP EIAPLAAIAC IASYLVSGHT GIYHAQRVGH SKHHRPLPEE
IRLSDIKQFH AQSESASERK VTLAGEEK