Gene Psyr_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1474 
Symbol 
ID3366973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1661962 
End bp1663512 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content39% 
IMG OID637651816 
Producthypothetical protein 
Protein accessionYP_234562 
Protein GI66044721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.385108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGA CTATGGCAAC CTTGATATTC AGACGCAATA CGAAAATCGG CAACCTAGAT 
GCCGAAACTG ATACCTTCCT AAAAAGTTGT TTTTTGGAAA CGGATGTTTA CTCAAATCTG
TTGAGCTTTG AAGATGGAAT AGATTTTGCC AAGCGGATAA TCGTTGGACG AACCGGATCA
GGTAAAACAG CACTTATAAA GCAGTTGTCC GAAAACCCTA AAATAAAGAA ACACTTAACT
ATTGAGGCTG AATCAACCGT ATTTGAACAC ATAAAAAACA ACGTATTTAT TTCAAAGCTA
ATCGACAATA ACGTAGACTT GAGAATATTC TACAAATCCT TATGGATACA CGTTCTACTT
GTTAAAGTCG TAGAATTATT ATACCCAGGC AAAAACTTTT TTGAAATGAT GCTGGACTTA
CCTACCACCG GCAAGAAGAA ATACAACGCA ACACTAGCGA AAGAATATGT CGAAAAATTC
AAAGACAATT TTTTTAATGA AAGCATAGTA AGTGAAATTA CTGAAAAAAT GCAACTAGAG
CTAGCGGGCG GCTTTACACT GCCGCCTGCA AAGCTAGATG GTAAAGCCAA TACAGAACTG
ACTGAGAAGA TACAGAGAGC CACTGCTCAA TACGTCAGTA CCGAACTGCT TCGAAAACAA
AAGGAGCTGA TCAAGGTTCT CACTGAGGAG AAGTCTCGTG AAGGCCAACA TCGCTTCATA
ATCAGCATCG ACGACCTTGA TAAATCTTGG CTGAGTTCAA GCGAAATACG ATATGACTTC
ATAAACTCGC TACTGGATGC CTTCAAAGAA CTCCTAGACA TCAAAACGGT AAAAATCATC
ATATCTATCC GAACCGACAT AATCCGTGGA ATATACCTTA AAAACCTGAG GCAAGAAGAG
AAAGACAAGT CTTTGATTTT GGATATCCAT TGGGACAAAC TCCAAATCCA AAAAATTCTT
GACAATAGAA TCGACTTCCT CATCAAAGAC AAATACCAGT CAAACGCTAC AACTCGATTC
TCTGATATTT TCTCTTTCCC AATTAAAAAC GAAGTTGCCC AAGATTACAT CCTGAGAAGG
ACCATGCTAA GGCCGAGGGA TGCTATCGAC TTTGTGAACT TATGTCTTTC TGAAGCTGAT
GGTTCAACCG CGCTGAATGA GAACCAAGTG ATAGAGGCGG AAGAAAAGTT TTATGTATCT
AGAAAGCAAG CATTATGCAA AGAATGGGCA AGTATTTTCC CTCAAATAAC CAGATACATA
AACGGCTTAG CGGAAATAGA AACACCCTCC TTCTTTTCGG TTGACATACA AGATAAAATC
GAACAAATCC AGATGGCGAT TCTGTCCTAT ACCCAAGAAG CTTCGGACAC GCTTACAAAT
GACATGGTCA GCGACTTCAA CCTACTCCTA AACATCTGGT TTATAGTTGG CGTAATTGGG
ATAAAAAAAT CAGACTCACT GATCATCTAC TCTAGCTTTG AAAAGCAAGA GCTTGACATC
AGCGACTATA AGAAAGAGTT CTATATTCAC CCACTTTTTT TTCGATACTA G
 
Protein sequence
MEMTMATLIF RRNTKIGNLD AETDTFLKSC FLETDVYSNL LSFEDGIDFA KRIIVGRTGS 
GKTALIKQLS ENPKIKKHLT IEAESTVFEH IKNNVFISKL IDNNVDLRIF YKSLWIHVLL
VKVVELLYPG KNFFEMMLDL PTTGKKKYNA TLAKEYVEKF KDNFFNESIV SEITEKMQLE
LAGGFTLPPA KLDGKANTEL TEKIQRATAQ YVSTELLRKQ KELIKVLTEE KSREGQHRFI
ISIDDLDKSW LSSSEIRYDF INSLLDAFKE LLDIKTVKII ISIRTDIIRG IYLKNLRQEE
KDKSLILDIH WDKLQIQKIL DNRIDFLIKD KYQSNATTRF SDIFSFPIKN EVAQDYILRR
TMLRPRDAID FVNLCLSEAD GSTALNENQV IEAEEKFYVS RKQALCKEWA SIFPQITRYI
NGLAEIETPS FFSVDIQDKI EQIQMAILSY TQEASDTLTN DMVSDFNLLL NIWFIVGVIG
IKKSDSLIIY SSFEKQELDI SDYKKEFYIH PLFFRY