| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1473 |
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| Symbol | |
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| ID | 3366972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1659653 |
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| End bp | 1661674 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637651815 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_234561 |
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| Protein GI | 66044720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.199053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGT ATCTGTGCGA GAAGCCCAGC CAGGGTAAAG ACATCGCCGC TGTACTCGGA
GCCAAAACAC GAGGTGACGG CTGCATCAAA GGCAACGGTG TAGCCGTGAC CTGGGGAATT
GGACACTTGC TGGAAACAGC CCCGCCCGAT GCATACGGCG AGCACCTGAA AAACTGGAGC
TTGGACACGC TTCCAATCCT GCCTGCGGAA TGGAAAGTGC TCGTCAAGCC GAAAACCGCC
AGTCAGTTCA AGATCGTCAA GCAGCTTCTC AAGCAGGCTA CCGAGCTCGT CATTGCGACA
GACGCTGACC GCGAGGGGGA GATGATCGCG CGCGAACTGA TCGAGTATTG TGGGTACCGA
GGACCGATTC AGAGGCTATG GCTGTCTGCG CTCAATGAAG CATCCATCCG CCAAGCGCTC
AACACCGTCA AGCAAGGCTC AGAAACCTAC CCGTTGTACC TCTCGGCGCT CGCTCGCTCC
AGAGCGGACT GGCTCATCGG TATGAATTTT TCGCGGCTAT TCACCCTGCT CGGCCGACAG
GCCGGGTACA CCGGTGTGCT CTCCGTCGGC CGTGTCCAAA CACCGACCCT TCGCCTGGTG
GTCGACCGCG ACCGGGATAT CTCGAACTTC ATACCCAAAC CGTTCTGGAG TGTCGAGGTT
CAGCTCTGGA CGGCAGGACA ATCGTTCTTG GCGAAATGGG TCGCCGATGA ATACCTGGTA
GATGAGGAAG GCCGTTGCCT TGATCAAGCT GCTGCAGCTG CTGCACTGGC CGCGCTGAAA
AGTAGTCAGG CTGCCTCAAC AGTTTCTGTT GATACAAAGC GTGGCAAGGA TCCAGCTCCG
CTCCCGTTCG ATCTGAGCAC CCTGCAGGAG GTGTGCTCTG CAAAGTTTGG GATGGGTGTG
CAAGAGACGC TGGACGTAGC ACAGTCACTT TACGAAACTC ACAAGGCGAC GACCTACCCA
AGGACCGATT GCGGGTACCT GCCGGAGAGC ATGTTTGACG AAGTGCCGAT GGTCCTCGAT
GCTCTGAATC GAACTGATCC ATCCATCGGC AAGACGCTGC AACTGATCGA CCCGGAGCAA
CGTTCCCGGG CATGGAATGA CAAAAAAATC ACTGGTCCCC ACCATGGGAT AATCCCCACG
CTTGAACCTG CAAACCTTTC AGCAATGTCT GAGAAGGAAC GCAAGGTCTA TGAATTGATC
CGCGCCCACT TCCTTGCGCA GTTCCTGCCT ACCCATGAGT ACGACCGGAC CGTGGCCACC
TTCGAATGCA ATGCAGTTCT GCTGCAAGCA GTGGGCAAGC GAATCGTGAT CCCAGGCTGG
AAGGTTCTTT TTTCTGCATC GTCCGAAGAA GAGGCTAATG ACAGTGGCGG CCGCTCTCAG
ATCCTGCCAG TGCTGCAAAT TGGCACTCGG TGTGACGTTC AGGACCTGCA TCTCAAATCG
CTGAAAACCG AGCCGCCCAA GGCTTACACC GAAGGTACAT TGATCAAAGC GATGAAAACC
ATTGCCAAGC TGGTGAAGGA TCCACGACTG GCTCAAAAGC TCAAGGAAAC CACCGGTATT
GGTACTGAAG CAACTCGCGC AGGCACGATT CAGGGCTTGA TAGACCGAGG GTCACTCATC
AAGAAAGGTA GCGCGCTGCG AGCAACTGAA GCAGCATTCT CGCTAATTGA TGCGGTCCCT
CCTGCTGTGG CCGATCCCGG CACAACTGCG ATATGGGAGC AAGCGCTTAC GATGATCGAG
CAAGGCACCT TGACGCTCGA TGATTTTATC GCCAGGCAAT CGAGCTGGAT CACCAGGCTC
GTCGAACAAT ACAAAGGCAC CACCTTGTCG ATCAAAGTGC CCGAAGGTCC CAAGTGCCCT
TTGTGCAGTG CGAAAACCTC GCAGCGTAAA GGATCCTCAG GCGTTTTCTG GGCGTGTTCC
CGCTACCCCG AATGCAAAGG TACGGTGAAC ATTGGTACAG GGAAGAAAAA ATCACCTGGC
AAGTCAGCCA AGCCCCGAGC CGCTACTGTC AAGAGCAGCT GA
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| Protein sequence | MRLYLCEKPS QGKDIAAVLG AKTRGDGCIK GNGVAVTWGI GHLLETAPPD AYGEHLKNWS
LDTLPILPAE WKVLVKPKTA SQFKIVKQLL KQATELVIAT DADREGEMIA RELIEYCGYR
GPIQRLWLSA LNEASIRQAL NTVKQGSETY PLYLSALARS RADWLIGMNF SRLFTLLGRQ
AGYTGVLSVG RVQTPTLRLV VDRDRDISNF IPKPFWSVEV QLWTAGQSFL AKWVADEYLV
DEEGRCLDQA AAAAALAALK SSQAASTVSV DTKRGKDPAP LPFDLSTLQE VCSAKFGMGV
QETLDVAQSL YETHKATTYP RTDCGYLPES MFDEVPMVLD ALNRTDPSIG KTLQLIDPEQ
RSRAWNDKKI TGPHHGIIPT LEPANLSAMS EKERKVYELI RAHFLAQFLP THEYDRTVAT
FECNAVLLQA VGKRIVIPGW KVLFSASSEE EANDSGGRSQ ILPVLQIGTR CDVQDLHLKS
LKTEPPKAYT EGTLIKAMKT IAKLVKDPRL AQKLKETTGI GTEATRAGTI QGLIDRGSLI
KKGSALRATE AAFSLIDAVP PAVADPGTTA IWEQALTMIE QGTLTLDDFI ARQSSWITRL
VEQYKGTTLS IKVPEGPKCP LCSAKTSQRK GSSGVFWACS RYPECKGTVN IGTGKKKSPG
KSAKPRAATV KSS
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