Gene Psyr_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1462 
Symbol 
ID3366961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1649070 
End bp1649609 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID637651804 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_234550 
Protein GI66044709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.430017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.598155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAT TACGGCCTAC GCTAACTACA CCTAGATTGA AGATTCGAGC GTTCCGTCCA 
GAAGATTTTG AATCGTTTTA CACTGCGATC AATGAACCGA AAATAGCAAC CAGTATGGGG
GCCTTAAGCT ACCCCTACCC AAAAGAAGAG GCTATTAAAT GGTTTGAATC TCACGAGGAG
ATGGAAGTGT CAGGGCGGTC GTTGGTAATG GCTATTACCT TTGAAGAAAA AGTTATTGGC
GCAGTGAGTT TGGTAGGTAT TTCTTATCAA CATTCGAGGT GCGCAGTGAC ATATTGGATT
TCTACGCCGT ACTGGGGGAA CGGATATTGC ACTGAAGCTC TGGAGGCCGT AATCCAATTT
GCGGCTAATG AACTGTCGAT TCACCGGATA TTTGCACAAT GCTTTGAAAG AAATTATTCA
TCGAGAAGAG TGCTCGAAAA AGTTGGCATG ACTTTTGATG GGCTTTTTGT CGACGACTAT
AAAAAAGACG GTGTATTTGA AAATATTGTG CAAATGTCAT TGATTAATAA AAAAGACTGA
 
Protein sequence
MNILRPTLTT PRLKIRAFRP EDFESFYTAI NEPKIATSMG ALSYPYPKEE AIKWFESHEE 
MEVSGRSLVM AITFEEKVIG AVSLVGISYQ HSRCAVTYWI STPYWGNGYC TEALEAVIQF
AANELSIHRI FAQCFERNYS SRRVLEKVGM TFDGLFVDDY KKDGVFENIV QMSLINKKD