Gene Psyr_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1458 
Symbol 
ID3366957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1644924 
End bp1645634 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID637651800 
Producthypothetical protein 
Protein accessionYP_234546 
Protein GI66044705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.923363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC CACTGCGCCC TTCTCTTTCC CGCGCCACCG TACTGCAAAT CCTGGCCCTG 
ATCGTCCTGA TCGGCATGCT GGTCTACCAG CAGTGGCAGA TTCTCCACCT GAAGACAGGT
TTTGAATCAG CTGCGAACCT GGAAACCGTC AACGCCATTA CCCAACGCAT CAATGGCGTG
GATGACCGGC TCGATGCTGC CAGCCAGCTG AAGTCCGTGA CCATCGATGA TTTCAGGGCT
GGCCAGCAGG CTCTTTCCAA CCGCATCGAT GCCGTTCAAG CCCTCCTGAA GCAGGTGCAG
GAGGCGGCGA AGGACGCTGC CCAACAGGGT GCCTCAATGC AAGAAGTTGT GGTCATGAAC
GCTCGGATCG AGGAGCTGCA GGTGAAACTG CAGGACCTGC GTGCGGCTAA ACCAGCATCT
GTTCAAATCT CGGCAGCCAA GCCAAAGACT CCACCCCCCT CCCGCAAATC AACAGCACAA
AGCAAAGTTC CGGAGGCTCC TCCACCGTTT TCGGTAGTGG GTGTGGAGTA TCGCGGAGGC
GAACGTTTCT TGTCAGTTGC CCCGCCTGGC AGCACTCAAC TGAGTCAACT GAACCTGATA
CGCCCGGGCG ACATGGTCGC GGGGAGCAAC TGGCAGCTCA ACAGCCTGGA TGATTCGCGC
GCCCTGTTCA GCATCAACGG CTCAACCCGC ATTCTGCCCC TGCGCCCTTA G
 
Protein sequence
MKLPLRPSLS RATVLQILAL IVLIGMLVYQ QWQILHLKTG FESAANLETV NAITQRINGV 
DDRLDAASQL KSVTIDDFRA GQQALSNRID AVQALLKQVQ EAAKDAAQQG ASMQEVVVMN
ARIEELQVKL QDLRAAKPAS VQISAAKPKT PPPSRKSTAQ SKVPEAPPPF SVVGVEYRGG
ERFLSVAPPG STQLSQLNLI RPGDMVAGSN WQLNSLDDSR ALFSINGSTR ILPLRP