Gene Psyr_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1453 
Symbol 
ID3366952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1640164 
End bp1640913 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content56% 
IMG OID637651795 
Producthypothetical protein 
Protein accessionYP_234541 
Protein GI66044700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.186215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TTGCCGATCG CGCGAAACAG CAACAAGACC ACGAACAGTC GTTCATAGGT 
TCTCTCTTCA CCCTGCCCTT CCGATTCGCG GCAGTAATGT TCCTCTCTCT GGGGGGAGCC
ATTATCGTCG AATGGATCTG CATGTACTTT TTCTGGCCGG AGGCCGGTTG GCAGCACGCT
CGCGCAATGC TCGATCATGA ACTCAGCTGG CTCTCTAAGG GGTTCCTGCA GAGTGTGGTT
GTTCAAGAGC CTGGCCGAAC AGCTACATGG CTGGTTCAAA CCACGTATGA CTGGCTGGTG
GTGAAGACTG GGCTTCAGGA CTGGGTTCAA CACACCTCTG ATTATGCTGC GACAGGACAA
CGATCACGCG GTTTTGATAT GCGCTACATG CTCGGTGTGG GAGTCAGCAA GTTTCAGGAT
TACGGCCTTG CTGCGCTCTA CACGACACTG GTGTTTTGCG TGCGCCTGGT GATCCTGACC
CTCGCAATCC CGTTATTTGT GATGACGGCA TTTGTTGGTT TTGTGGACGG GCTGGTGCGC
AGAGACTTGC GGCGGTTCGG TGCCGGCCGC GAGTCCAGCT ACCTCTATCA CAAAGCTCGA
GCAACGATGG TGCCGCTGGT GATAGTCCCC TGGAGCCTTT ACCTGGCTCT GCCATTCAGC
GTGAGCCCTT TGCTAGTGCT CCTGCCATGC GCGGCACTGC TCGGCCTGGC GGTCAGCATT
ACGGCGTCCA GCTTCAAAAA ATACCTTTAG
 
Protein sequence
MADVADRAKQ QQDHEQSFIG SLFTLPFRFA AVMFLSLGGA IIVEWICMYF FWPEAGWQHA 
RAMLDHELSW LSKGFLQSVV VQEPGRTATW LVQTTYDWLV VKTGLQDWVQ HTSDYAATGQ
RSRGFDMRYM LGVGVSKFQD YGLAALYTTL VFCVRLVILT LAIPLFVMTA FVGFVDGLVR
RDLRRFGAGR ESSYLYHKAR ATMVPLVIVP WSLYLALPFS VSPLLVLLPC AALLGLAVSI
TASSFKKYL