Gene Psyr_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1423 
Symbol 
ID3366922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1611700 
End bp1612392 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content57% 
IMG OID637651766 
Producthypothetical protein 
Protein accessionYP_234512 
Protein GI66044671 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.918741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAC GCTACTCGAT CTACGAATCC ATGGACCACT ACCTCAAGGA GCTTGCCCCA 
GAGCAGATCG TGATCAATGG GTACGACCTC CTGCCCATAG AGCGCTACAA CGTGGCTCCT
AGCACTCGGG TTGAGATCAT CCGTCCCACC GAGGGGGGTC TGAGTGTCGA CAAGGTTCGG
TGGGGGTGGG AGCCTTTCTG GGCGAAAGGC AAACGACCAG CCCCAATCAA CGCTCGAGTC
GAAACCGTAA TGACGGGAAA GTTCTTCAAA GAGCTCTGGC CTACCGGACG GGCAGTTGCC
CCAGCGAACG GTTGGTTTGA ATGGGTGAAG GACCCGGATG ACCCCAAGAA AAAGCAGCCC
TACTTCATCC GTCTCAAGAG TAAAAAGCCT ATGTTCTTCG CGGCATTGGC CCAGGTCCAC
AGAGGGCTTG AGCCGCATGA TGGCGACGGG TTTGTCATCA TCACGTCGGC AAGCGACTCG
GGAATGGTGG ACATTCATGA TCGCCGCCCG GTGGTACTGA CGGCGGAAGA TGCGCGGGCA
TGGCTTGATT CCGAAACTAC ACCGCAGAAA GCCGAAGCGT TGGCAAAAGA GCACTGCAGG
ATTGTTGACG ATTTTGAATG GTTCACGGTT GATCGCGCAG TGGGGAACGT GCGGAATCAA
GGACCGGAGC TCATCCAGCC CGTTGAGCTT TGA
 
Protein sequence
MCGRYSIYES MDHYLKELAP EQIVINGYDL LPIERYNVAP STRVEIIRPT EGGLSVDKVR 
WGWEPFWAKG KRPAPINARV ETVMTGKFFK ELWPTGRAVA PANGWFEWVK DPDDPKKKQP
YFIRLKSKKP MFFAALAQVH RGLEPHDGDG FVIITSASDS GMVDIHDRRP VVLTAEDARA
WLDSETTPQK AEALAKEHCR IVDDFEWFTV DRAVGNVRNQ GPELIQPVEL